{"id":"W2020083160","doi":"10.1093/nar/gkq030","title":"Promoter chromatin remodeling of immediate-early genes is mediated through H3 phosphorylation at either serine 28 or 10 by the MSK1 multi-protein complex","year":2010,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":157,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Chromatin immunoprecipitation; Biology; Phosphorylation; Chromatin remodeling; Transcription factor; Chromatin structure remodeling (RSC) complex; SWI/SNF; Cell biology; Promoter; Molecular biology; Chromatin; Transcription (linguistics); Immunoprecipitation; Serine; Gene; Gene expression; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008636669,0.0001921618,0.0001878556,0.00005311372,0.0002782863,0.0000492909,0.0004962755,0.0003010295,0.00214749],"category_scores_gemma":[0.0004026941,0.0001289083,0.0000806642,0.0002819185,0.0003934581,0.00002056986,0.0003633862,0.000375661,0.000152586],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003043425,"about_ca_system_score_gemma":0.0001082254,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002623996,"about_ca_topic_score_gemma":0.0001304603,"domain_scores_codex":[0.997938,0.0002155281,0.0003856375,0.0004347815,0.0006032592,0.0004227521],"domain_scores_gemma":[0.998627,0.00003801223,0.0001325813,0.0006653253,0.0004383599,0.0000987243],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002648621,0.00008483721,0.0003485863,0.00002931069,0.00003070654,8.864319e-7,0.0003051955,0.000001667235,0.9849292,0.00001115779,0.01018461,0.003808979],"study_design_scores_gemma":[0.0008808892,0.000321223,0.001137768,0.0000186147,0.000004483959,0.000004420762,0.00009567869,0.003641073,0.9178397,0.00003225205,0.07586227,0.0001616275],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964294,0.000311901,0.0004175385,0.001234767,0.00006937291,0.0008443236,0.00008687705,0.00002265737,0.0005831104],"genre_scores_gemma":[0.9861991,0.0001180958,0.004285257,0.0001346243,0.0001918948,0.00009220387,0.0002870439,0.00005648694,0.008635287],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0670895,"threshold_uncertainty_score":0.9987647,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05778082654211322,"score_gpt":0.3387186310439499,"score_spread":0.2809378045018367,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}