{"id":"W2020474547","doi":"10.1016/j.aquaculture.2010.07.014","title":"Characterization of rainbow trout (Oncorhynchus mykiss) intestinal microbiota and inflammatory marker gene expression in a recirculating aquaculture system","year":2010,"lang":"en","type":"article","venue":"Aquaculture","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":103,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; University of Saskatchewan","keywords":"Biology; Firmicutes; Rainbow trout; Aeromonas salmonicida; Proteobacteria; Aquaculture; Fish meal; Aeromonas; Microbiology; Soybean meal; Food science; Gene; Ecology; Genetics; Bacteria; Fishery; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001294337,0.0001884767,0.0002423363,0.0002653039,0.0002901962,0.0002803938,0.0001455448,0.000158961,0.000550851],"category_scores_gemma":[0.0001460716,0.0001394969,0.000185106,0.0001458093,0.0002654529,0.0002531337,0.0002549962,0.0002787085,0.0001364388],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003768866,"about_ca_system_score_gemma":0.0005285479,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004534349,"about_ca_topic_score_gemma":0.01075246,"domain_scores_codex":[0.999905,0.000009893828,0.0000055942,0.00003254585,0.00002064782,0.00002636589],"domain_scores_gemma":[0.9998759,0.00001165011,0.00002992941,0.00001049849,0.00002634496,0.00004572415],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003176269,0.00003837035,0.004925272,0.000008097499,0.000004506452,0.00003764274,0.00007698756,0.00002138595,0.9940307,0.00001965882,0.00001392407,0.0005059311],"study_design_scores_gemma":[0.00007354758,0.002215265,0.6744577,0.000007164942,0.0001031089,0.0004162882,0.0007885753,0.001357397,0.319707,0.00007341758,0.0007776559,0.0000228974],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995442,0.0000312702,0.0001892995,0.000009115236,0.000002202001,0.000008426558,0.0000896683,0.000003803475,0.0001220503],"genre_scores_gemma":[0.9965056,0.00008072471,0.001034972,0.00004125737,0.000004485162,0.00004541904,0.0004962716,0.00001089292,0.001780302],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004534349,"threshold_uncertainty_score":0.009015918,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005481290889420657,"score_gpt":0.2041059575404398,"score_spread":0.1986246666510191,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}