{"id":"W2020729533","doi":"10.1128/jcm.03321-14","title":"Molecular Profiling of Escherichia coli O157:H7 and Non-O157 Strains Isolated from Humans and Cattle in Alberta, Canada","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture Food and Rural Development; Provincial Laboratory of Public Health; Ministry of Health; University of Alberta","funders":"Alberta Health Services","keywords":"Escherichia coli; Microbiology; Biology; Profiling (computer programming); Enterobacteriaceae; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002147579,0.0002374106,0.0002566117,0.001426951,0.001075404,0.0006923441,0.0002950148,0.0002896644,0.0005908681],"category_scores_gemma":[0.0004822589,0.0001701981,0.0001379829,0.001342392,0.0004876002,0.00007008344,0.0002600379,0.0002303031,0.0001587409],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00303906,"about_ca_system_score_gemma":0.002398977,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.7843154,"about_ca_topic_score_gemma":0.8709953,"domain_scores_codex":[0.9996597,0.00002749921,0.00001450821,0.00004887168,0.0001425079,0.0001068958],"domain_scores_gemma":[0.9996108,0.00002744139,0.00003543811,0.000007215484,0.000219624,0.00009948583],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007337301,0.0001321946,0.937579,0.00008589999,0.0000457869,0.001442543,0.002012229,0.0002310267,0.04317222,0.00009210681,0.0006309229,0.01384228],"study_design_scores_gemma":[0.000004277838,0.00008997641,0.9955332,0.00001003245,0.00001644693,0.0004716567,0.001376375,0.0001398853,0.001615054,0.000008164649,0.0007306036,0.000004310756],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998121,0.0003648866,0.0001010769,0.0000430976,0.000004987059,0.00001764889,0.0005276389,0.000003666742,0.0008160424],"genre_scores_gemma":[0.9966137,0.0005243957,0.0002960789,0.00007452788,0.000005758736,0.000006099352,0.001047711,0.000003384912,0.001428431],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2156846,"threshold_uncertainty_score":0.4339096,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01381068221403161,"score_gpt":0.3081037974317791,"score_spread":0.2942931152177475,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}