{"id":"W2020742948","doi":"10.1111/j.1755-0998.2008.02241.x","title":"Computation vs. cloning: evaluation of two methods for haplotype determination","year":2008,"lang":"en","type":"article","venue":"Molecular Ecology Resources","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":142,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"U.S. Fish and Wildlife Service; Delta Waterfowl; National Science Foundation","keywords":"Haplotype; Biology; Genetics; Allele; Population; Cloning (programming); Polymerase chain reaction; Recombination; Evolutionary biology; Computational biology; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001163825,0.0001054684,0.0001487255,0.0001145681,0.0001511863,0.00001027711,0.0001457861,0.0001363792,0.00001784096],"category_scores_gemma":[0.0005627653,0.0001168518,0.00009868248,0.0001162511,0.0001508794,0.000004834454,0.00003482245,0.00004354777,0.000006468588],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001924429,"about_ca_system_score_gemma":0.0000816849,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00000396833,"about_ca_topic_score_gemma":0.00001020158,"domain_scores_codex":[0.9985886,0.0004703729,0.0003283901,0.0003143635,0.0001589575,0.0001393184],"domain_scores_gemma":[0.9986821,0.00005821999,0.0002728897,0.0002451131,0.0007058595,0.00003586018],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007123788,0.0001046143,0.002833294,0.00002091913,0.00006277785,3.852479e-7,0.0002721631,0.002047163,0.9823942,0.0005139345,0.0004595168,0.01121977],"study_design_scores_gemma":[0.001511374,0.0003082414,0.02247068,0.000005128171,0.0001195952,0.00003001931,0.0000521828,0.02975824,0.9347444,0.0006381341,0.01017939,0.0001826332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7749023,0.0002523348,0.2237612,0.0001431833,0.0001638509,0.0004157276,0.000004613679,0.00001362346,0.0003430671],"genre_scores_gemma":[0.9608938,0.00001398259,0.03826948,0.0001358593,0.00004556376,0.0001558825,0.0002661679,0.000020093,0.0001991451],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1859915,"threshold_uncertainty_score":0.476508,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05774894608557874,"score_gpt":0.4068996584307512,"score_spread":0.3491507123451725,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}