{"id":"W2020879581","doi":"10.1109/cibcb.2010.5510703","title":"Classifying Cytochrome c Oxidase subunit 1 by translation initiation mechanism using side effect machines","year":2010,"lang":"en","type":"article","venue":"","topic":"Machine Learning in Bioinformatics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Genomics Institute; Genome Canada","keywords":"Mechanism (biology); Cytochrome c oxidase; Translation (biology); Side effect (computer science); Protein subunit; Computer science; Machine translation; SIGNAL (programming language); Computational biology; Gene; Artificial intelligence; Oxidase test; Biology; Enzyme; Genetics; Mitochondrion; Biochemistry; Messenger RNA; Physics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00196454,0.0006146849,0.0006879669,0.0007822579,0.0005001304,0.000930001,0.0005567465,0.001113495,0.0005650446],"category_scores_gemma":[0.006963918,0.000188872,0.0005968335,0.0004066601,0.000562203,0.001053268,0.000445831,0.0007311406,0.0002806532],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003871462,"about_ca_system_score_gemma":0.0002999393,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003265818,"about_ca_topic_score_gemma":0.0002874257,"domain_scores_codex":[0.9989184,0.0003860202,0.0001046545,0.0002824696,0.0002045441,0.0001038625],"domain_scores_gemma":[0.9939499,0.004123936,0.0005308975,0.0005633815,0.0006677789,0.0001640403],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.002279891,0.0007654689,0.1141462,0.000337618,0.0003693314,0.0005154702,0.0004309302,0.3425956,0.1828346,0.003499768,0.002177892,0.3500472],"study_design_scores_gemma":[0.00002961671,0.0002632508,0.01130302,0.00001081756,0.00003851017,0.0001175542,0.00006622523,0.9467213,0.0356291,0.005368192,0.0004222001,0.00003012993],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9385267,0.0001542453,0.05971909,0.0001437475,0.00004637973,0.00005218857,0.0002013958,0.0003388387,0.0008172374],"genre_scores_gemma":[0.974513,0.0000470543,0.02440751,0.00003536466,0.00002229673,0.00005017223,0.000579074,0.00002077796,0.0003247534],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00196454,"threshold_uncertainty_score":0.01038963,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01104965006066701,"score_gpt":0.2750441271057714,"score_spread":0.2639944770451044,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}