{"id":"W2021341910","doi":"10.1094/phyto-03-11-0064","title":"Tryptophan Regulates Thaxtomin A and Indole-3-Acetic Acid Production in <i>Streptomyces scabiei</i> and Modifies Its Interactions with Radish Seedlings","year":2011,"lang":"en","type":"article","venue":"Phytopathology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Tryptophan; Biology; Biosynthesis; Streptomyces; Phytotoxin; Indole-3-acetic acid; Virulence; Biochemistry; Tryptamine; Microbiology; Amino acid; Plant hormone; Tryptophan synthase; Gene; Botany; Bacteria; Auxin; Toxin; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007608705,0.0001168531,0.0001605519,0.00002485266,0.00008614731,0.00002162115,0.00006012028,0.0000500811,0.00001243205],"category_scores_gemma":[0.0000215113,0.00005194466,0.00001586383,0.0001432311,0.0001325649,0.0001351216,0.00003379712,0.00008530802,0.000002221226],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006552868,"about_ca_system_score_gemma":0.000005349872,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000226862,"about_ca_topic_score_gemma":0.0009121496,"domain_scores_codex":[0.9992751,0.00005352699,0.0001240648,0.0003035469,0.00005606249,0.0001876864],"domain_scores_gemma":[0.9997844,0.00002986528,0.00005968428,0.00003960128,0.00002725411,0.00005923414],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003023546,0.0001275336,0.1524084,0.0000357717,0.000009202571,0.00004892852,0.001025764,0.000001655107,0.8310037,0.00006099801,0.00005339029,0.01492234],"study_design_scores_gemma":[0.0001939424,0.0001886107,0.8199892,0.00006309068,0.00001847523,0.0002351397,0.0005840138,0.00002160596,0.1772413,0.001026949,0.0002694923,0.0001681798],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975671,0.001308351,5.134764e-7,0.00056994,0.0000542883,0.000152646,0.00002318381,0.0000292353,0.0002947203],"genre_scores_gemma":[0.9990528,0.0005383265,0.000125986,0.00006781501,0.0000673459,0.0000313721,0.00001250547,0.000001152232,0.0001027553],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6675808,"threshold_uncertainty_score":0.2118242,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02229694731960074,"score_gpt":0.1969388748603194,"score_spread":0.1746419275407186,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}