{"id":"W2021604805","doi":"10.1139/gen-2014-0158","title":"The evolution of genomic GC content undergoes a rapid reversal within the genus <i>Plasmodium</i>","year":2014,"lang":"en","type":"article","venue":"Genome","topic":"Malaria Research and Control","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa; Concordia University","funders":"Natural Sciences and Engineering Research Council of Canada; Concordia University","keywords":"Biology; Lineage (genetic); GC-content; Phylogenetic tree; Genome; Evolutionary biology; Plasmodium falciparum; Plasmodium vivax; Phylogenetics; Plasmodium (life cycle); Genetics; Molecular evolution; Gene; Parasite hosting; Malaria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00113163,0.0001055484,0.0002030598,0.00004138365,0.0002063359,0.00002562249,0.0002524284,0.00005408303,0.00006815239],"category_scores_gemma":[0.0002714429,0.000053432,0.0001120259,0.00009124415,0.0002036848,0.0000290885,0.00007023826,0.0002233947,0.0001035104],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001654921,"about_ca_system_score_gemma":0.0002546753,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003229663,"about_ca_topic_score_gemma":0.000135929,"domain_scores_codex":[0.9987465,0.0001886464,0.0002658899,0.0001691321,0.0003298734,0.0002999817],"domain_scores_gemma":[0.9988776,0.0002408873,0.0001217991,0.0005165596,0.0001323194,0.0001108663],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00371619,0.0001725922,0.001584622,0.0001531927,0.0007134426,0.00001657139,0.001175594,0.0001907126,0.8527855,0.127164,0.001826876,0.0105007],"study_design_scores_gemma":[0.02160423,0.005152118,0.6022274,0.0001520313,0.0008730155,0.0003493865,0.008182669,0.01296245,0.006586052,0.01266486,0.3284411,0.0008046652],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9350358,0.00915984,0.007491027,0.0317622,0.0005255418,0.001885666,0.00002878701,0.00006540325,0.01404575],"genre_scores_gemma":[0.9965556,0.0001158123,0.0001052048,0.0004256712,0.0002477682,0.00004031644,0.000005329535,0.00001394017,0.00249039],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8461995,"threshold_uncertainty_score":0.2178894,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01877693190331987,"score_gpt":0.2300114934480813,"score_spread":0.2112345615447614,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}