{"id":"W2022011021","doi":"10.1074/jbc.m406044200","title":"Helix Induction in Antimicrobial Peptides by Alginate in Biofilms","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":103,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Biofilm; Antimicrobial; Chemistry; Antimicrobial peptides; Helix (gastropod); Microbiology; Peptide; Biochemistry; Biophysics; Bacteria; Biology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002762902,0.0001677052,0.000383819,0.0000727979,0.00004203217,0.00001514984,0.0002064789,0.00043884,0.0001433638],"category_scores_gemma":[0.00009061087,0.000125228,0.0001255056,0.000152181,0.000272437,0.0001301828,0.00005330193,0.0006972563,0.00002351856],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001171988,"about_ca_system_score_gemma":0.00006008841,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008473018,"about_ca_topic_score_gemma":0.0000041872,"domain_scores_codex":[0.9989115,0.00005165829,0.000516495,0.000180745,0.00002812323,0.0003114984],"domain_scores_gemma":[0.99953,0.00004407956,0.0002765655,0.00008084606,0.00004397576,0.00002452002],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001946541,0.0002969263,0.004100292,0.00001718064,0.00002158289,0.00004177998,0.00006407686,0.00004781366,0.9933516,0.00001113756,0.001318709,0.0005342353],"study_design_scores_gemma":[0.001689064,0.000146074,0.003718017,0.000149545,0.000005227868,0.0004748623,0.0002791706,1.252481e-7,0.9917519,0.0001547664,0.001473291,0.0001579707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979079,0.0009165668,0.00002378891,0.000577122,0.0001990066,0.00004980979,0.00001968091,0.00001120142,0.000294901],"genre_scores_gemma":[0.9989882,0.0003988117,0.0001571833,0.0001434126,0.00006843638,0.000001181973,0.00002845691,0.000007156032,0.0002071701],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001599726,"threshold_uncertainty_score":0.5106652,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01349814974326842,"score_gpt":0.2283396409345941,"score_spread":0.2148414911913256,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}