{"id":"W2022173172","doi":"10.1128/aac.00119-14","title":"Fluoroquinolone-Resistant Escherichia coli Sequence Type 131 Isolates Causing Bloodstream Infections in a Canadian Region with a Centralized Laboratory System: Rapid Emergence of the <i>H</i> 30-Rx Sublineage","year":2014,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"","keywords":"Escherichia coli; Bloodstream infection; Microbiology; Enterobacteriaceae; Virology; Biology; Sequence (biology); Multilocus sequence typing; Genetics; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005213062,0.0006056767,0.0004269905,0.001070594,0.002168778,0.0009034648,0.001196021,0.0004881712,0.0008550143],"category_scores_gemma":[0.00119551,0.0004429255,0.0003997582,0.002266667,0.001037868,0.0003090969,0.0007446003,0.0005329499,0.0001289649],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01885653,"about_ca_system_score_gemma":0.02048957,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.979807,"about_ca_topic_score_gemma":0.9887483,"domain_scores_codex":[0.998949,0.00005765252,0.0000379066,0.0001998394,0.000432067,0.0003236415],"domain_scores_gemma":[0.9988543,0.00006022726,0.0002342677,0.00003840989,0.0004913448,0.0003216098],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000665132,0.0000555275,0.994091,0.00002810146,0.00004562822,0.0003253709,0.0006234483,0.0001317253,0.001676377,0.00003020688,0.0003503768,0.002575753],"study_design_scores_gemma":[0.000007046027,0.00008678717,0.9983345,0.000006818896,0.0000152658,0.0002606377,0.0006233035,0.0002481547,0.0001425372,0.00000601816,0.0002606794,0.000008393451],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990284,0.00006831413,0.00007343366,0.00003362904,0.000001904651,0.00003248546,0.0004483181,0.000005794288,0.0003077062],"genre_scores_gemma":[0.998953,0.00009313271,0.0002430871,0.00005728368,0.000003831719,0.000009451272,0.0004837514,0.000001736912,0.0001546396],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02019298,"threshold_uncertainty_score":0.1368143,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008184728138450807,"score_gpt":0.2212265338137503,"score_spread":0.2130418056752995,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}