{"id":"W2022420753","doi":"10.1139/g07-110","title":"Plant simple sequence repeats: distribution, variation, and effects on gene expression","year":2008,"lang":"en","type":"article","venue":"Genome","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Genetics; Gene; Sequence (biology); Gene expression; Evolutionary biology; Variation (astronomy); Computational biology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006355422,0.00009022205,0.00007980134,0.00001384276,0.0002112036,0.0000113284,0.00007062128,0.00007028178,0.00001068225],"category_scores_gemma":[0.00003639618,0.00007978942,0.00002393619,0.00002832422,0.00003070255,0.000001841159,0.00005859864,0.00003518305,0.00001176226],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000654788,"about_ca_system_score_gemma":0.00002028899,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000153381,"about_ca_topic_score_gemma":6.515391e-7,"domain_scores_codex":[0.9994233,0.00002709286,0.00008456215,0.0002428863,0.00008117207,0.0001409628],"domain_scores_gemma":[0.9996883,0.00001090335,0.00003841133,0.000161669,0.0000303494,0.00007038549],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003663718,0.00001962239,0.002157317,0.00001267383,0.00001139819,0.00001918524,0.0000985184,0.00003871653,0.9949407,0.00003096753,0.002531988,0.0001022929],"study_design_scores_gemma":[0.0009196886,0.0006978992,0.2593859,0.00002734177,0.00002035466,0.0002238922,0.00003677609,0.00002784759,0.5905963,0.0002232782,0.1474437,0.0003971102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970765,0.00033658,0.001805532,0.00005858624,0.00005469584,0.00008414285,0.0003292284,0.00001249425,0.0002422705],"genre_scores_gemma":[0.997306,0.0004681416,0.0003287498,0.0002922963,0.0001546222,0.000004366012,0.001095864,0.000004452637,0.0003455169],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4043444,"threshold_uncertainty_score":0.3253718,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01386463215153202,"score_gpt":0.2105017308512665,"score_spread":0.1966370986997344,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}