{"id":"W2022456957","doi":"10.1111/j.1574-6968.2006.00565.x","title":"Generation and annotation of lodgepole pine and oleoresin-induced expressed sequences from the blue-stain fungus<i>Ophiostoma clavigerum</i>, a Mountain Pine Beetle-associated pathogen","year":2006,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Forest Insect Ecology and Management","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Cancer Agency; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canada's Michael Smith Genome Sciences Centre","keywords":"Pinus contorta; Biology; Expressed sequence tag; Dendroctonus; cDNA library; Ophiostoma; Mountain pine beetle; Fungus; Botany; Ceratocystis; Bark beetle; Complementary DNA; Genetics; Gene; Twig; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002931737,0.0001706001,0.0001917425,0.00003881966,0.0002098943,0.00002152571,0.0001478336,0.0001416423,0.00008970319],"category_scores_gemma":[0.00003015395,0.0001360082,0.00003060208,0.0001362452,0.0004937861,0.0001063394,0.0001289739,0.0001187888,0.00001411942],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008111726,"about_ca_system_score_gemma":0.000007992415,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003265707,"about_ca_topic_score_gemma":0.003805761,"domain_scores_codex":[0.9987801,0.0002489051,0.0002784189,0.0003708917,0.00005925433,0.0002624286],"domain_scores_gemma":[0.9994737,0.0001052689,0.0002071945,0.0001766872,0.0000104119,0.000026725],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002913984,0.00004585275,0.02775439,0.000003078848,0.00003203125,0.0000110028,0.0004412843,0.0005241649,0.9630948,0.00005402158,0.007726506,0.0002837169],"study_design_scores_gemma":[0.001511553,0.0002762162,0.866218,0.00002217543,0.00008342533,0.00001948525,0.0002169965,0.0007420928,0.1277369,0.0004949406,0.002305373,0.000372842],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957653,0.0001999798,0.000180894,0.003181725,0.0001190854,0.0003554677,0.0001319905,0.00002712319,0.00003849211],"genre_scores_gemma":[0.9959425,0.00002496171,0.000303829,0.003068708,0.00006162191,0.00002892697,0.000497179,0.00001108912,0.00006115182],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8384637,"threshold_uncertainty_score":0.5546254,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008545186424337926,"score_gpt":0.1985295957913311,"score_spread":0.1899844093669932,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}