{"id":"W2022709714","doi":"10.1007/s00705-015-2429-8","title":"Analysis of complete genome sequences and a V239A substitution in the helicase domain of swine hepatitis E virus strains isolated in Canada","year":2015,"lang":"en","type":"article","venue":"Archives of Virology","topic":"Hepatitis Viruses Studies and Epidemiology","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Virology; Virulence; Hepatitis E virus; Genome; Helicase; Strain (injury); Genotype; Genetics; Medical microbiology; Virus; Whole genome sequencing; Gene; RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003513371,0.00009189617,0.0007578661,0.0002949183,0.00001569793,5.320811e-7,0.00009886004,0.00003888228,0.0000127526],"category_scores_gemma":[0.0002045197,0.0000670344,0.00005462751,0.0003769523,0.0005297191,0.00001609031,0.00004752421,0.00011808,1.646879e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003974949,"about_ca_system_score_gemma":0.0002475865,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9530913,"about_ca_topic_score_gemma":0.992278,"domain_scores_codex":[0.9986214,0.0003609281,0.0005625956,0.0001619916,0.00009597089,0.000197103],"domain_scores_gemma":[0.9990715,0.0004751459,0.0001942732,0.0001807026,0.00002359993,0.00005475568],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002799315,0.0000693122,0.966454,0.0000388547,0.0003013669,0.00008614297,0.00315205,0.0009062056,0.02770972,0.0006720216,0.000007353494,0.0003230614],"study_design_scores_gemma":[0.0008222783,0.0006238788,0.9901363,0.00001793992,0.0001532779,0.00002110127,0.0004696394,0.006926599,0.00003623691,0.0006037061,0.0001395482,0.00004952272],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974362,0.000701861,0.0002823191,0.0009024708,0.0000184784,0.0001646701,0.0002034329,0.000001810894,0.0002887672],"genre_scores_gemma":[0.9968397,0.00216182,0.0004071955,0.0005250096,0.000008639569,0.000008315503,0.00004503026,0.000003250047,0.000001008979],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03918668,"threshold_uncertainty_score":0.2733584,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04870501401412967,"score_gpt":0.2877251633287833,"score_spread":0.2390201493146536,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}