{"id":"W2022711406","doi":"10.1371/journal.pgen.1001241","title":"Genome-Wide Interrogation of Mammalian Stem Cell Fate Determinants by Nested Chromosome Deletions","year":2010,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Biology; Genome; Genetics; Gene; Embryonic stem cell; Computational biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001174902,0.0001786281,0.0001745632,0.00006995117,0.0000695191,0.00002446546,0.0004084404,0.0002234595,0.00003895918],"category_scores_gemma":[0.00001502958,0.0001856855,0.00008046925,0.0001174539,0.0001234319,0.000004209293,0.0001965627,0.000176351,0.0000507511],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001724041,"about_ca_system_score_gemma":0.0001014126,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005470866,"about_ca_topic_score_gemma":0.00008933349,"domain_scores_codex":[0.9986333,0.0000696542,0.0003380209,0.0003573067,0.0002591325,0.0003425824],"domain_scores_gemma":[0.9989603,0.00001615463,0.0001260409,0.00055295,0.0001943097,0.0001502602],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001830691,0.0001884,0.007352293,0.00007589599,0.00002223274,0.00000269384,0.00006132074,0.00003044339,0.9917269,9.428875e-7,0.0001496729,0.000370905],"study_design_scores_gemma":[0.0003650066,0.0002318769,0.002532681,0.000009914192,0.00002558322,0.000007496593,0.00006507416,0.0009018364,0.9888542,0.00000538724,0.006812788,0.0001881812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998138,0.0003521577,0.0002893907,0.00004008598,0.0001214124,0.0003112472,0.0001097243,0.00001244075,0.0006255301],"genre_scores_gemma":[0.9973647,0.0001461747,0.0004213333,0.00003916557,0.00008582319,0.00002973045,0.0002227696,0.00004306273,0.001647257],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006663115,"threshold_uncertainty_score":0.7572036,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01373375240924717,"score_gpt":0.2460156766431331,"score_spread":0.2322819242338859,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}