{"id":"W2023006132","doi":"10.1002/gcc.21999","title":"Poly‐gene fusion transcripts and chromothripsis in prostate cancer","year":2012,"lang":"en","type":"article","venue":"Genes Chromosomes and Cancer","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; BC Cancer Agency; Simon Fraser University; University of British Columbia","funders":"Canadian Institutes of Health Research; Pfizer","keywords":"Chromothripsis; Chromoplexy; Biology; Fusion gene; Genome; Gene; Genetics; Transcriptome; Computational biology; Cancer; Genome instability; Prostate cancer; DNA; Gene expression; DNA damage; PCA3","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008576512,0.0001646106,0.0001076392,0.0003056067,0.0001565389,0.0002343031,0.00009204443,0.0002719873,0.0009616013],"category_scores_gemma":[0.0001933584,0.0001042224,0.0001266429,0.0003107269,0.0002597044,0.0001691636,0.0001812568,0.0003235528,0.0001364806],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001830085,"about_ca_system_score_gemma":0.0001209477,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004752799,"about_ca_topic_score_gemma":0.0008275802,"domain_scores_codex":[0.9999306,0.00001031868,0.000003842902,0.00002035843,0.0000237284,0.00001110427],"domain_scores_gemma":[0.9998319,0.00004088894,0.00006890872,0.00001543005,0.000007319471,0.00003554235],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001155839,0.00001501469,0.005916785,0.00003324188,0.0000159172,0.000758426,0.00003356755,0.0002976612,0.9889823,0.000278316,0.00005995254,0.003493284],"study_design_scores_gemma":[0.00003624531,0.0007144502,0.4011726,0.00001302633,0.0001035471,0.01127333,0.0001812646,0.005014097,0.5735492,0.002291668,0.005610159,0.00004057096],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945152,0.001654191,0.002787403,0.00008178472,0.000009288141,0.000008859012,0.000179291,0.00006030071,0.0007036924],"genre_scores_gemma":[0.9981718,0.0004032342,0.000764425,0.00002801777,0.000005963126,0.000003418866,0.0001832861,0.000005888771,0.0004339634],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009616013,"threshold_uncertainty_score":0.003216863,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007591368027311139,"score_gpt":0.2372217416933058,"score_spread":0.2296303736659947,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}