{"id":"W2023532035","doi":"10.1006/viro.2002.1770","title":"A Shine-Dalgarno-like Sequence Mediates in Vitro Ribosomal Internal Entry and Subsequent Scanning for Translation Initiation of Coxsackievirus B3 RNA","year":2002,"lang":"en","type":"article","venue":"Virology","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Internal ribosome entry site; Biology; Shine-Dalgarno sequence; Start codon; Eukaryotic translation; Ribosomal binding site; Five prime untranslated region; Initiation factor; Eukaryotic initiation factor; Genetics; Ribosome; Translation (biology); Molecular biology; Untranslated region; RNA; Ribosomal RNA; Eukaryotic Small Ribosomal Subunit; Messenger RNA; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000234999,0.00009220319,0.0002568046,0.0003216313,0.00004339276,0.00000643504,0.00004837504,0.0001516724,0.00007580713],"category_scores_gemma":[0.0001487125,0.00008475847,0.00004667715,0.0001688671,0.0002126429,0.0001198197,0.00001973486,0.0002308699,0.000005192237],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005769908,"about_ca_system_score_gemma":0.00003546871,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002199602,"about_ca_topic_score_gemma":0.0000467507,"domain_scores_codex":[0.9991282,0.00008952574,0.0002889819,0.0001817635,0.00008407534,0.0002274313],"domain_scores_gemma":[0.9995853,0.0001334828,0.00007750079,0.00009693259,0.0000631464,0.0000436122],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000828882,0.0001215782,0.01639798,0.00006159065,0.00004959885,0.00002135273,0.0004892608,0.00001310123,0.9365814,0.0001297016,0.00001985523,0.04528571],"study_design_scores_gemma":[0.01810759,0.006210939,0.477935,0.0002612604,0.000208092,0.0007868445,0.0003014607,0.1253639,0.3662602,0.001597556,0.002493771,0.0004733603],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994413,0.002212842,0.00094785,0.001500137,0.00009933492,0.0003340251,0.00001673495,0.00001701651,0.0004590506],"genre_scores_gemma":[0.9983924,0.0007290434,0.0004526027,0.0001987769,0.00006096665,0.00006055144,0.00003528328,0.00001047972,0.00005990099],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5703211,"threshold_uncertainty_score":0.345635,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06974683521767347,"score_gpt":0.3286072216446859,"score_spread":0.2588603864270124,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}