{"id":"W2024236935","doi":"10.1016/j.tim.2007.05.004","title":"Integrons: mobilizable platforms that promote genetic diversity in bacteria","year":2007,"lang":"en","type":"article","venue":"Trends in Microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":335,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University","funders":"National Medical Research Council; National Health and Medical Research Council; Australian Research Council; Macquarie University","keywords":"Biology; Horizontal gene transfer; Genetic diversity; Genetics; Genome; Phylogenetic tree; Gene; Mobile genetic elements; Bacterial genome size; Evolutionary biology; Plasmid; Computational biology; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004178871,0.0002266748,0.000276415,0.0002504445,0.00005619829,0.00001056744,0.0003926601,0.0003975143,0.0002040475],"category_scores_gemma":[0.00002798171,0.0002088361,0.00007363985,0.0002262483,0.000215756,0.00000720057,0.000484031,0.0001893009,0.00002123017],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008721454,"about_ca_system_score_gemma":0.00002826653,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001285206,"about_ca_topic_score_gemma":0.003606094,"domain_scores_codex":[0.9984642,0.00004214416,0.0003406416,0.0005291656,0.00003756037,0.00058633],"domain_scores_gemma":[0.9994043,0.00001648823,0.0001020919,0.0003997373,0.00002206652,0.00005532164],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002268315,0.00009126935,0.3277977,0.000009843757,0.00001566445,0.00003459074,0.0001186046,0.000007228727,0.6675466,0.00001886321,0.0003353026,0.003797529],"study_design_scores_gemma":[0.001449816,0.0003183815,0.7853158,0.00004486275,0.000009626345,0.0001190016,0.0002116177,0.000007454935,0.2026943,0.0001701123,0.009226618,0.0004324545],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979041,0.0003293727,0.000320767,0.00002461605,0.0002998618,0.0001339482,0.0000285959,0.00001326146,0.0009454621],"genre_scores_gemma":[0.9952881,0.000112699,0.003212826,0.0001113016,0.00006190224,0.000003250063,0.0002691924,0.00002036945,0.0009203836],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4648523,"threshold_uncertainty_score":0.851609,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02016523441554229,"score_gpt":0.266387400056491,"score_spread":0.2462221656409487,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}