{"id":"W2024290367","doi":"10.1371/journal.pone.0010142","title":"The Effect of Single Nucleotide Polymorphisms from Genome Wide Association Studies in Multiple Sclerosis on Gene Expression","year":2010,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Multiple Sclerosis Research Studies","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"University of Oxford; Wellcome Trust","keywords":"Single-nucleotide polymorphism; Genetics; Biology; Genome-wide association study; Gene expression; Gene; Genetic variation; Genetic association; Human leukocyte antigen; Expression quantitative trait loci; Genetic predisposition; Multiple sclerosis; Genotype; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009109311,0.0005262006,0.0008332625,0.001641498,0.0005102254,0.001061799,0.0005278511,0.0007618302,0.002171939],"category_scores_gemma":[0.01496711,0.0002607402,0.001115451,0.002199948,0.0006566099,0.0003615773,0.0006178519,0.001115743,0.0002135483],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002117089,"about_ca_system_score_gemma":0.0002719938,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008839824,"about_ca_topic_score_gemma":0.001293157,"domain_scores_codex":[0.9927671,0.004011371,0.000582358,0.001401142,0.001018159,0.0002198235],"domain_scores_gemma":[0.9641797,0.03040336,0.002738938,0.001460718,0.0005845622,0.0006327964],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00272762,0.0001219614,0.9500358,0.0002789581,0.006403009,0.0008438007,0.0001447271,0.001230706,0.02040011,0.0001135566,0.0003059931,0.01739376],"study_design_scores_gemma":[0.00006856709,0.0003527225,0.9914218,0.00002652591,0.002619905,0.001049546,0.00005099869,0.0009491266,0.002465705,0.0004019999,0.0005766844,0.00001648956],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928966,0.003352037,0.002186624,0.0002382039,0.00003782443,0.00001531141,0.0006261979,0.00003199683,0.000615282],"genre_scores_gemma":[0.996923,0.000731828,0.001263907,0.000152679,0.00004676959,0.00002471259,0.0007113552,0.00002083336,0.0001247716],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009109311,"threshold_uncertainty_score":0.04817516,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1151185656760937,"score_gpt":0.2897395554628842,"score_spread":0.1746209897867905,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}