{"id":"W2024740577","doi":"10.1136/sti.79.3.237","title":"Correlation between culture testing of swabs and ligase chain reaction of first void urine from patients recently treated for Chlamydia trachomatis","year":2003,"lang":"en","type":"article","venue":"Sexually Transmitted Infections","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Ligase chain reaction; Chlamydia trachomatis; Urine; Medicine; Chlamydia; Azithromycin; Chlamydia trachomatis infection; Sex organ; Chlamydiaceae; Gynecology; Polymerase chain reaction; Internal medicine; Immunology; Microbiology; Antibiotics; Biology; Multiplex polymerase chain reaction; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003234931,0.0002091894,0.0003717284,0.0003079381,0.0003426381,0.00001060174,0.00005855689,0.0003299916,0.00006938197],"category_scores_gemma":[0.001329756,0.0002017649,0.00008450822,0.0006591482,0.0001998752,0.0002386246,0.000009041893,0.0003744616,0.000009390567],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006579838,"about_ca_system_score_gemma":0.00005552493,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001293534,"about_ca_topic_score_gemma":0.0002907524,"domain_scores_codex":[0.9984382,0.0002574911,0.0005798966,0.000401128,0.00006816163,0.0002551393],"domain_scores_gemma":[0.9978741,0.0009034459,0.0002826533,0.0002720354,0.0006302278,0.00003756282],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008848232,0.0009870338,0.7657712,0.00008889096,0.0004130186,2.083678e-7,0.001040983,0.00007992172,0.2204665,0.00008437182,0.000134563,0.01084492],"study_design_scores_gemma":[0.002925185,0.00104008,0.8127887,0.00008216046,0.0002371793,0.00001237492,0.0001968195,0.00003233782,0.1788389,0.0003470336,0.00329731,0.0002018927],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917775,0.0002930577,0.005259215,0.00003696839,0.0002861068,0.001045419,0.0004990041,0.00008936963,0.0007132927],"genre_scores_gemma":[0.9980444,0.00007951879,0.0004974051,0.000003740192,0.00003373328,0.0001087897,0.0008830864,0.00002807746,0.0003212584],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04701758,"threshold_uncertainty_score":0.8227733,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01970489926507692,"score_gpt":0.2632700876041208,"score_spread":0.2435651883390439,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}