{"id":"W2024769775","doi":"10.1016/j.virol.2009.02.006","title":"Fragile X mental retardation protein restricts replication of human immunodeficiency virus type 1","year":2009,"lang":"en","type":"article","venue":"Virology","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biology; Infectivity; ESCRT; Group-specific antigen; Virus; Virology; Cell biology; Mutant; Gene knockdown; Viral replication; Internalization; Endosome; APOBEC3G; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low","status":"direct model label, unvalidated"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high","status":"direct model label, unvalidated"}],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000872324,0.00008073178,0.00008537901,0.00004048384,0.00006149546,0.000003935898,0.0001310173,0.00008494936,0.0000192189],"category_scores_gemma":[0.00003530861,0.00008380475,0.00002863295,0.00009264326,0.00004575707,0.00000211799,0.00003969924,0.00004558457,0.000009240252],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006388157,"about_ca_system_score_gemma":0.00002519455,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001565686,"about_ca_topic_score_gemma":0.000005883287,"domain_scores_codex":[0.9992954,0.0000370633,0.0001824857,0.0002874582,0.00007063172,0.000126969],"domain_scores_gemma":[0.9994898,0.000001381743,0.00009250947,0.0003553205,0.00003985739,0.00002107782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005398693,0.00008638576,0.0001518025,0.000002305111,0.000005402565,3.965302e-7,0.00002911105,0.00000779429,0.9962528,0.0001970105,0.0003645955,0.002848362],"study_design_scores_gemma":[0.0002495156,0.001225995,0.1560601,0.00000237303,0.000004387516,0.000004540189,0.00001042648,0.0000152548,0.8382273,0.0003896089,0.003722094,0.00008833745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973189,0.0002478734,0.00005537172,0.0001780655,0.00004917059,0.0002056912,0.000005792133,0.000007406567,0.001931711],"genre_scores_gemma":[0.9989675,0.0001092048,0.0002285316,0.0002217724,0.000009382962,0.000007876443,0.0002426799,0.000007377807,0.0002056454],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1580255,"threshold_uncertainty_score":0.3417459,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01205074734994907,"score_gpt":0.2593357058173005,"score_spread":0.2472849584673514,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}