{"id":"W2024774860","doi":"10.1371/journal.pone.0059358","title":"Genomic Organization, Phylogenetic Comparison and Differential Expression of the SBP-Box Family Genes in Grape","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":142,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Chinese Universities Scientific Fund; National Natural Science Foundation of China","keywords":"Synteny; Biology; Arabidopsis; Gene; Gene family; Genetics; Phylogenetic tree; Arabidopsis thaliana; MADS-box; Zinc finger; Protein domain; Candidate gene; Genome; Transcription factor; Mutant","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009830514,0.0001630164,0.0002049803,0.0006684462,0.0002153421,0.0002148992,0.0001431001,0.0001544632,0.0005756351],"category_scores_gemma":[0.0001081883,0.00009760915,0.000270539,0.0005901665,0.0001326226,0.00008093514,0.0001706417,0.0001888423,0.0002613139],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001816085,"about_ca_system_score_gemma":0.000133286,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001056414,"about_ca_topic_score_gemma":0.001019237,"domain_scores_codex":[0.9999372,0.000004393492,0.000004608416,0.00003356596,0.000009971843,0.00001015885],"domain_scores_gemma":[0.9998879,0.00002284495,0.0000248627,0.000008816387,0.00002119357,0.00003430057],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005150821,0.0000432719,0.03970145,0.0002270683,0.00005217607,0.000415076,0.0003848906,0.0002181688,0.9490763,0.000156078,0.0001230383,0.009087462],"study_design_scores_gemma":[0.0000229107,0.00031306,0.9476781,0.00003551312,0.0001300055,0.001436714,0.0003842753,0.001425644,0.04215105,0.0002487798,0.006155703,0.00001815231],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973527,0.0004978571,0.0006730204,0.00001161469,0.000004907507,0.00001035262,0.0009401832,0.00001603494,0.00049343],"genre_scores_gemma":[0.9911494,0.0003570144,0.002089627,0.00002360168,0.00000688068,0.00002676485,0.005535008,0.000009653674,0.0008020289],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001056414,"threshold_uncertainty_score":0.002100587,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03211417478523424,"score_gpt":0.2038087984492027,"score_spread":0.1716946236639685,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}