{"id":"W2025051269","doi":"10.1128/jcm.39.4.1429-1435.2001","title":"Evaluation of the NucliSens Basic Kit for Detection of <i>Chlamydia trachomatis</i> and <i>Neisseria gonorrhoeae</i> in Genital Tract Specimens Using Nucleic Acid Sequence-Based Amplification of 16S rRNA","year":2001,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; Hamilton Regional Laboratory Medicine Program","funders":"","keywords":"Neisseria gonorrhoeae; NASBA; Chlamydia trachomatis; Biology; Nucleic acid; Virology; Multiplex; Sexually transmitted disease; Microbiology; RNA; Molecular biology; Gene; Syphilis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006546722,0.0001584872,0.000756874,0.0003198851,0.00007525205,0.000005915702,0.0002483975,0.0004294045,0.00008876977],"category_scores_gemma":[0.003194227,0.0001201047,0.0003556105,0.0003849549,0.0007747493,0.000155783,0.00003341766,0.0006128954,0.000002751043],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000123418,"about_ca_system_score_gemma":0.0004919036,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000514473,"about_ca_topic_score_gemma":0.00007353912,"domain_scores_codex":[0.9954948,0.001828176,0.002101685,0.000280131,0.00005272896,0.0002424081],"domain_scores_gemma":[0.9948655,0.001272601,0.002088386,0.000340791,0.001404766,0.00002789654],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008663405,0.0006952941,0.04164376,0.00003600241,0.000156578,2.927846e-7,0.00008331935,0.0004467648,0.9409516,0.00001370554,0.00001368668,0.01509265],"study_design_scores_gemma":[0.004151055,0.000888594,0.3360426,0.0001063635,0.0003517602,0.0006203568,0.0001301399,0.0002865145,0.6564504,0.0003751773,0.0004841576,0.0001129391],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964136,0.0008496128,0.0009690829,0.0001449004,0.0008269379,0.0006786273,0.00007104637,0.000003858173,0.0000423715],"genre_scores_gemma":[0.9991616,0.0001537559,0.0005335488,0.00002178702,0.00008540207,0.000007114344,0.00001091403,0.00001617301,0.000009718269],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2943988,"threshold_uncertainty_score":0.4897726,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1605795374119781,"score_gpt":0.4124782270919116,"score_spread":0.2518986896799335,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}