{"id":"W2025722365","doi":"10.1128/jcm.00493-15","title":"Molecular Assay for Detection of Genetic Markers Associated with Decreased Susceptibility to Cephalosporins in Neisseria gonorrhoeae","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen Elizabeth II Health Sciences Centre; Saskatchewan Disease Control Laboratory; Dr. Georges-L.-Dumont University Hospital Centre; Provincial Laboratory of Public Health; Public Health Agency of Canada; Toronto Public Health; Ste. Anne's Hospital; Public Health Ontario; BC Centre for Disease Control","funders":"Public Health Agency","keywords":"Neisseria gonorrhoeae; MTRR; Cefixime; Cephalosporin; Nucleic Acid Amplification Tests; Microbiology; Biology; Gonorrhea; Virology; Neisseria; Polymerase chain reaction; Genotype; Genetics; Antibiotics; Chlamydia trachomatis; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.006008422,0.0001708273,0.0008662645,0.0003281074,0.00003341173,0.000006111616,0.0002854205,0.0004629159,0.0000402701],"category_scores_gemma":[0.01450357,0.000133441,0.0002668738,0.0003903094,0.0003670402,0.0000704964,0.00005355174,0.0006791144,0.0000195709],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001854652,"about_ca_system_score_gemma":0.0005868528,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001187134,"about_ca_topic_score_gemma":0.0004865118,"domain_scores_codex":[0.9958941,0.001772435,0.001574471,0.0003600233,0.000021667,0.0003772613],"domain_scores_gemma":[0.995729,0.001679159,0.0008491507,0.0003286201,0.001302391,0.0001117336],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.006548344,0.0009206855,0.1888521,0.00001080327,0.0003355232,0.000004887489,0.00004774643,0.0002993541,0.7953768,0.00000758979,0.0001827585,0.007413425],"study_design_scores_gemma":[0.007930666,0.01157281,0.8259889,0.00007851481,0.0001226361,0.0003570723,0.0001766971,0.000007349877,0.1476995,0.000249142,0.005593634,0.0002230176],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938276,0.0003397684,0.004055127,0.0002247456,0.0008789178,0.0005694776,0.00002956066,0.000009428744,0.00006534624],"genre_scores_gemma":[0.9989371,0.00001480018,0.0008117963,0.00006583268,0.00005535008,0.0000137126,0.00001865077,0.00001930522,0.00006347738],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6476772,"threshold_uncertainty_score":0.9937977,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04871002686064121,"score_gpt":0.3698768883406841,"score_spread":0.3211668614800429,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}