{"id":"W2026504187","doi":"10.3389/fped.2015.00036","title":"Development of a Custom-Designed, Pan Genomic DNA Microarray to Characterize Strain-Level Diversity among Cronobacter spp.","year":2015,"lang":"en","type":"article","venue":"Frontiers in Pediatrics","topic":"Enterobacteriaceae and Cronobacter Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada","funders":"U.S. Food and Drug Administration; Gachon University; Kyungpook National University","keywords":"Cronobacter; Biology; Genomics; Genetics; Genome; Microarray; DNA microarray; Genotyping; Virulence; Gene; Evolutionary biology; Enterobacter; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004905785,0.000247615,0.0003090137,0.0002501193,0.00008970464,0.00004141076,0.0005713077,0.0002227539,0.00001733365],"category_scores_gemma":[0.00006479089,0.0002633243,0.00008939634,0.0002327434,0.00008422307,0.00001972284,0.0008267513,0.0001583432,0.00002516593],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001862608,"about_ca_system_score_gemma":0.0003710704,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000522672,"about_ca_topic_score_gemma":0.0001553769,"domain_scores_codex":[0.9981991,0.00008905651,0.0004262296,0.0004882845,0.000275305,0.0005220395],"domain_scores_gemma":[0.9989993,0.00000577081,0.0001437185,0.0003969461,0.0001428847,0.000311412],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003769753,0.0001578086,0.6816332,0.00005016994,0.00005271752,0.000008698164,0.001659434,0.000005454835,0.301344,8.550144e-7,0.01017168,0.004539014],"study_design_scores_gemma":[0.001915612,0.0002716038,0.9081382,0.00002040248,0.00003745523,0.000003888024,0.001528778,0.000004438568,0.05829017,0.00001448538,0.02917791,0.0005971023],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9894607,0.0001362649,0.009044471,0.00003540192,0.0005925476,0.0003852818,0.0001707335,0.00001096025,0.0001636332],"genre_scores_gemma":[0.9639705,0.00008780266,0.03443019,0.0001147968,0.0002911143,0.00002644942,0.0003220561,0.00003715518,0.0007198931],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2430539,"threshold_uncertainty_score":0.9999819,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03273455029779367,"score_gpt":0.2447817648224706,"score_spread":0.2120472145246769,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}