{"id":"W2026544533","doi":"10.1071/rdv27n1ab331","title":"331 ABNORMAL DNA METHYLATION PATTERNS AND ALLELE-SPECIFIC EXPRESSION OF IMPRINTED GENES IN BOVINE-INDUCED PLURIPOTENT STEM CELLS","year":2014,"lang":"en","type":"article","venue":"Reproduction Fertility and Development","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"","keywords":"Biology; Reprogramming; Genomic imprinting; DNA methylation; SOX2; Genetics; Homeobox protein NANOG; XIST; Epigenetics; Molecular biology; Differentially methylated regions; Methylation; Gene; Induced pluripotent stem cell; Gene expression; Embryonic stem cell; X-inactivation; X chromosome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008258439,0.000146569,0.0001813542,0.00009372061,0.00007615804,0.00001772356,0.00007801838,0.0001179101,0.000009801751],"category_scores_gemma":[0.00002504662,0.0001356768,0.00002512359,0.0000715572,0.00004167084,0.00001322982,0.0001922335,0.00009246246,0.000002345784],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003172978,"about_ca_system_score_gemma":0.00004574742,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003041402,"about_ca_topic_score_gemma":0.00003594806,"domain_scores_codex":[0.9983259,0.0001705097,0.000411451,0.0006718705,0.0002173423,0.0002029549],"domain_scores_gemma":[0.9993174,0.00001191119,0.0001036524,0.0003717708,0.0001136085,0.00008167593],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003546411,0.00008085163,0.01311916,0.0001124935,0.00001105864,5.558183e-7,0.0001751821,0.00003029242,0.9250645,0.000001318033,0.00001081473,0.06103912],"study_design_scores_gemma":[0.0003690553,0.00008426564,0.2372618,0.00002058094,0.000001701258,0.000003241269,0.0001113945,0.0000606593,0.7578074,0.000005231189,0.004167348,0.0001073827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948673,0.000649643,0.003961743,0.00008270076,0.00009870491,0.0002970785,0.000002340989,0.00001044771,0.00003008377],"genre_scores_gemma":[0.9985524,0.0004460133,0.0007578461,0.000008303543,0.00004230798,0.00002317009,0.00003718154,0.00001056508,0.0001222591],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2241426,"threshold_uncertainty_score":0.5532739,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02528269986142197,"score_gpt":0.2481968287140952,"score_spread":0.2229141288526732,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}