{"id":"W2026880330","doi":"10.1002/prot.23048","title":"Tat peptide‐calmodulin binding studies and bioinformatics of HIV‐1 protein–calmodulin interactions","year":2011,"lang":"en","type":"article","venue":"Proteins Structure Function and Bioinformatics","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"School of Medicine, Indiana University","keywords":"Calmodulin; Melittin; Calmodulin-binding proteins; Peptide; Biochemistry; Target peptide; Transactivation; Proteome; Plasma protein binding; Binding site; Biology; Binding protein; Calcium-binding protein; Chemistry; Transcription factor; Calcium; Gene; Enzyme","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003112591,0.0003555893,0.0004793274,0.0007011723,0.0005384206,0.0004386645,0.0003768559,0.0004067243,0.001325646],"category_scores_gemma":[0.0006993511,0.0001611421,0.0004790227,0.0006820529,0.0001056864,0.0002376366,0.0002129062,0.0004244108,0.000426784],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003178304,"about_ca_system_score_gemma":0.0003810185,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002823207,"about_ca_topic_score_gemma":0.004643051,"domain_scores_codex":[0.9998068,0.00005051932,0.00001206224,0.00006453821,0.00004325199,0.00002287132],"domain_scores_gemma":[0.9998167,0.00008928872,0.00002434063,0.00001298287,0.00002955627,0.00002717458],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002425144,0.0006342825,0.06098632,0.000590972,0.0003339106,0.00119912,0.0003967409,0.04784954,0.801038,0.00246348,0.005243925,0.0768385],"study_design_scores_gemma":[0.0001216338,0.0003827577,0.07845452,0.00002470974,0.0001730129,0.0009361727,0.0002427246,0.7581529,0.1483491,0.002060795,0.01105658,0.00004503505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9779131,0.0005930768,0.01735988,0.0001328738,0.00001031397,0.00004200055,0.002050648,0.0008178237,0.001080307],"genre_scores_gemma":[0.93674,0.0003651598,0.05365048,0.00005044886,0.000009345676,0.00005324652,0.008424157,0.00008827982,0.000618858],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002823207,"threshold_uncertainty_score":0.005613625,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02546558652921095,"score_gpt":0.2650618375425914,"score_spread":0.2395962510133804,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}