{"id":"W2026940625","doi":"10.1016/j.chembiol.2011.09.017","title":"Paenibacillus polymyxa PKB1 Produces Variants of Polymyxin B-Type Antibiotics","year":2011,"lang":"en","type":"article","venue":"Chemistry & Biology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":130,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Paenibacillus polymyxa; Biology; Gene cluster; Polymyxin; Gene; Nonribosomal peptide; Microbiology; Peptide; Lantibiotics; Polymyxin B; Antibiotics; Paenibacillus; Biosynthesis; Biochemistry; Bacteria; Bacteriocin; Genetics; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002467115,0.000944656,0.00053875,0.0004819406,0.000260018,0.0007386552,0.0005780834,0.0006774766,0.001272779],"category_scores_gemma":[0.0005359348,0.0004079084,0.0004337969,0.0006089847,0.0003995072,0.0003520694,0.0006802441,0.001569314,0.0009422716],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006670646,"about_ca_system_score_gemma":0.000329342,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002619656,"about_ca_topic_score_gemma":0.00142465,"domain_scores_codex":[0.999519,0.00008386937,0.00005376902,0.00007014321,0.0001829379,0.00009035154],"domain_scores_gemma":[0.99953,0.0001128383,0.0001389092,0.00008892529,0.00004187694,0.0000875579],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001068153,0.00004361793,0.0001804562,0.00002029902,0.000007449577,0.00008754969,0.00001933617,0.0001488285,0.9984027,0.0001182149,0.00004549474,0.0008193265],"study_design_scores_gemma":[0.00001410564,0.0001239378,0.002262456,0.000005166899,0.00001199914,0.0004607682,0.00005258684,0.000698938,0.9948026,0.00004923985,0.001508159,0.00001012297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938497,0.0005148145,0.003004247,0.0002068918,0.00006757109,0.00004100755,0.0008950363,0.0001149247,0.001305822],"genre_scores_gemma":[0.9912156,0.0003276895,0.002440452,0.0000511811,0.00001920712,0.00003728614,0.001919961,0.0001573308,0.003831239],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002619656,"threshold_uncertainty_score":0.00520885,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02017485188386103,"score_gpt":0.2468594776014239,"score_spread":0.2266846257175628,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}