{"id":"W2026979696","doi":"10.1186/1471-2164-10-88","title":"Microarray-based comparative genomic profiling of reference strains and selected Canadian field isolates of Actinobacillus pleuropneumoniae","year":2009,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences; Public Health Agency of Canada; McGill University; CTT Group (Canada); University of Guelph; Cegep de Saint Hyacinthe; National Research Council Canada; Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Actinobacillus pleuropneumoniae; Biology; Gene; Genetics; Genome; Serotype; Comparative genomics; Genomic island; DNA microarray; Microbiology; Genomics; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018789,0.0004382172,0.0003524319,0.0008266293,0.0004193496,0.0002998426,0.0002351679,0.0002866228,0.0009061927],"category_scores_gemma":[0.0003301578,0.0001368583,0.0002817046,0.001316317,0.0001912864,0.0001109177,0.0001610412,0.0003271947,0.0002058138],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009301587,"about_ca_system_score_gemma":0.0006481966,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02711352,"about_ca_topic_score_gemma":0.03988677,"domain_scores_codex":[0.9996942,0.00001883123,0.00001338902,0.0001084061,0.00010007,0.00006513682],"domain_scores_gemma":[0.999833,0.00004086482,0.00002734097,0.000009397358,0.00006950067,0.00001994631],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001949061,0.00005383796,0.003323133,0.00008108601,0.00001397372,0.00002371068,0.00008731907,0.0002607763,0.9923306,0.0000440215,0.0001412834,0.003445358],"study_design_scores_gemma":[0.00002986165,0.0008811048,0.537798,0.00002791482,0.0001572444,0.0003963377,0.0005654512,0.008425545,0.4451512,0.0001147283,0.006418279,0.00003435584],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9835706,0.0005785156,0.004468873,0.00008156597,0.00001546072,0.0000789841,0.009482668,0.0001267575,0.001596559],"genre_scores_gemma":[0.9455417,0.0009152284,0.02190095,0.0001842214,0.00001853721,0.0003080301,0.02750511,0.00004003174,0.003586208],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9728865,"threshold_uncertainty_score":0.05391139,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04215169203736212,"score_gpt":0.2809389699436921,"score_spread":0.2387872779063299,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}