{"id":"W2027263004","doi":"10.1073/pnas.0812431106","title":"The porin OmpD from nontyphoidal <i>Salmonella</i> is a key target for a protective B1b cell antibody response","year":2009,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":173,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Environmental Health Sciences; Biotechnology and Biological Sciences Research Council; Wellcome Trust","keywords":"Salmonella; Microbiology; Antigen; Biology; Porin; Bacterial outer membrane; Population; Bacteremia; Germinal center; Antibody; Immunology; Virology; B cell; Bacteria; Medicine; Escherichia coli; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001176179,0.0003320511,0.0001484241,0.0001644742,0.000134077,0.0002666962,0.000149345,0.0002765043,0.002258385],"category_scores_gemma":[0.00008295779,0.0001307813,0.0001689111,0.0000595547,0.0001422397,0.0001682995,0.0002391242,0.000624709,0.0008956997],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001939591,"about_ca_system_score_gemma":0.00009087932,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002157251,"about_ca_topic_score_gemma":0.0002534063,"domain_scores_codex":[0.9998846,0.00001867024,0.00000645762,0.00002661692,0.00002510526,0.00003852175],"domain_scores_gemma":[0.9999069,0.0000117694,0.00002831343,0.000009239633,0.00001386295,0.00002989801],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006978102,0.00001687978,0.0004659985,0.00003393478,0.000001914254,0.00003691083,0.000009062666,0.00001641236,0.9976986,0.0000497207,0.00007628012,0.001524472],"study_design_scores_gemma":[0.00002772497,0.001164929,0.05004093,0.0000411461,0.00002755567,0.002020888,0.0001062459,0.0004947678,0.9344216,0.0001218781,0.01152673,0.000005605828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9897882,0.003094995,0.002182363,0.0001942759,0.00003981827,0.00002900056,0.000240777,0.0001251119,0.004305627],"genre_scores_gemma":[0.9937748,0.001123023,0.001359342,0.0001430501,0.00003063394,0.00002429425,0.0004542831,0.00002408051,0.003066469],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002258385,"threshold_uncertainty_score":0.007555068,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03375636966409619,"score_gpt":0.2938294625409091,"score_spread":0.2600730928768129,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}