{"id":"W2027336285","doi":"10.1016/j.aquaculture.2009.07.027","title":"Development of single nucleotide polymorphism markers for Atlantic cod (Gadus morhua) using expressed sequences","year":2009,"lang":"en","type":"article","venue":"Aquaculture","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University","funders":"Genome Atlantic; Atlantic Canada Opportunities Agency","keywords":"Biology; Gadus; Atlantic cod; Single-nucleotide polymorphism; Genetics; SNP; SNP genotyping; Expressed sequence tag; Fishery; Evolutionary biology; Gene; Genome; Genotype; Fish <Actinopterygii>","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005591926,0.0004822662,0.0003770525,0.0006630427,0.0002509422,0.0005506024,0.0005784847,0.0003791033,0.0005194284],"category_scores_gemma":[0.0007311646,0.000462548,0.0004355627,0.0004951434,0.000286028,0.0002839345,0.0003925708,0.001054549,0.0003830606],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000444066,"about_ca_system_score_gemma":0.000697234,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003858682,"about_ca_topic_score_gemma":0.009554033,"domain_scores_codex":[0.9997365,0.00003460721,0.00002520438,0.000108885,0.00006143674,0.00003338713],"domain_scores_gemma":[0.999436,0.0001574115,0.0001369428,0.00005261114,0.00012698,0.00009005037],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001058203,0.00005114537,0.005299496,0.00002991137,0.00002013006,0.00004276629,0.00005911082,0.0004189872,0.9824133,0.0002143699,0.00003408833,0.01131087],"study_design_scores_gemma":[0.0001066534,0.0005483365,0.09031615,0.0000381507,0.0002401381,0.0003046675,0.0001506432,0.00963046,0.8927811,0.0004438278,0.005407101,0.00003277999],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9201966,0.0004921369,0.0743032,0.0001741971,0.00004945592,0.0002260584,0.002014742,0.0002220083,0.002321603],"genre_scores_gemma":[0.8309331,0.0006133747,0.1568764,0.0002239045,0.00002634517,0.0002508396,0.006127283,0.0001284021,0.004820431],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003858682,"threshold_uncertainty_score":0.007672429,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02720851780198289,"score_gpt":0.2534141028263358,"score_spread":0.2262055850243529,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}