{"id":"W2027632223","doi":"10.1021/es049671d","title":"Biodegradation of Octahydro-1,3,5,7- tetranitro-1,3,5,7-tetrazocine (HMX) by <i>Phanerochaete chrysosporium</i>:  New Insight into the Degradation Pathway","year":2004,"lang":"en","type":"article","venue":"Environmental Science & Technology","topic":"Analytical chemistry methods development","field":"Chemistry","cited_by":74,"is_retracted":false,"has_abstract":true,"ca_institutions":"Biotechnology Research Institute","funders":"Strategic Environmental Research and Development Program; U.S. Environmental Protection Agency","keywords":"Phanerochaete; Biodegradation; Chrysosporium; Mineralization (soil science); Chemistry; Environmental chemistry; Environmental remediation; Hydrolysis; Formaldehyde; Bioremediation; Incubation; Nitrite; Soil water; Biotransformation; Organic chemistry; Contamination; Lignin; Nitrogen; Biochemistry; Enzyme; Geology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003841993,0.0003156393,0.0002949011,0.0002085865,0.0003463198,0.00002851947,0.001187066,0.0002803263,0.0004317168],"category_scores_gemma":[0.0001834259,0.0002482047,0.0000741041,0.001287939,0.002470798,0.0002912043,0.0003341782,0.0004317907,0.00004900239],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008681347,"about_ca_system_score_gemma":0.0002302869,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007690729,"about_ca_topic_score_gemma":0.00001003393,"domain_scores_codex":[0.9973407,0.00001337691,0.0005460854,0.0007289478,0.0008386733,0.0005322006],"domain_scores_gemma":[0.9987676,0.00005527482,0.0002721214,0.0007037495,0.00001993615,0.0001812777],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001208951,0.0001236231,0.001373033,0.00001225155,0.00001515844,0.00000434904,0.0003784049,0.00002335684,0.982259,0.0005374499,0.00002505602,0.01523625],"study_design_scores_gemma":[0.0006011489,0.00006263623,0.0002297774,0.00002684308,0.00002381418,0.00002700731,0.0005284022,0.00005285948,0.9858796,0.002404801,0.009891503,0.0002716269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9745787,0.0007142182,0.01919881,0.003082328,0.00008127501,0.000156009,0.00001883869,0.0001613539,0.002008461],"genre_scores_gemma":[0.9828255,0.0001742509,0.01559683,0.0001145978,0.0000396583,0.00002088294,0.00006186876,0.000023624,0.001142846],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01496463,"threshold_uncertainty_score":0.999997,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007280247401171909,"score_gpt":0.2196553823514351,"score_spread":0.2123751349502631,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}