{"id":"W2027658726","doi":"10.1172/jci67201","title":"Whole exome sequencing of adenoid cystic carcinoma","year":2013,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Salivary Gland Tumors Diagnosis and Treatment","field":"Medicine","cited_by":273,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Dental and Craniofacial Research; National Research Council Canada; University of Texas MD Anderson Cancer Center; National Cancer Institute; National Institutes of Health; Fonds Wetenschappelijk Onderzoek; Wellcome Trust; Vlaamse regering; Adenoid Cystic Carcinoma Research Foundation","keywords":"Exome sequencing; Biology; CDKN2A; Cancer research; Genetics; Cancer; Adenoid cystic carcinoma; Mutation; PTPN11; Gene; KRAS; Carcinoma","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007306891,0.00009091584,0.0005256426,0.00009772897,0.00002214927,0.00001267754,0.00006418625,0.00008954851,0.0001268265],"category_scores_gemma":[0.001424751,0.00006091472,0.0002337292,0.0001210824,0.0001195188,0.0001875211,0.00001384277,0.0002486321,0.00005049213],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005495837,"about_ca_system_score_gemma":0.0003047612,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006847106,"about_ca_topic_score_gemma":0.000001363132,"domain_scores_codex":[0.9979623,0.0001236577,0.001380996,0.0001009638,0.0003226976,0.0001093686],"domain_scores_gemma":[0.9976977,0.0005480708,0.0008837598,0.0001491113,0.0004224177,0.0002989846],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005003331,0.0001744632,0.9933071,0.00005748459,0.00008626449,0.00007847657,0.0001201629,0.00001958166,0.002888936,0.0001449468,0.001938964,0.001133551],"study_design_scores_gemma":[0.001935393,0.001492867,0.9854305,0.0003316693,0.000235925,0.0002088288,0.0001007121,0.0003540596,0.006417294,0.00332542,0.0001130766,0.00005420801],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961253,0.000373517,0.00004637348,0.002613025,0.0003041269,0.0001641127,0.000001796804,0.000006142161,0.0003655384],"genre_scores_gemma":[0.9954898,0.00004599188,0.00319879,0.000617339,0.0005085954,0.000004380708,0.000006746362,0.00001015631,0.0001182055],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007876589,"threshold_uncertainty_score":0.248403,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1057163886436836,"score_gpt":0.3644965958066748,"score_spread":0.2587802071629911,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}