{"id":"W2027825927","doi":"10.1371/journal.pone.0079475","title":"The Transcriptional Landscape of Campylobacter jejuni under Iron Replete and Iron Limited Growth Conditions","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Campylobacter jejuni; Regulon; Biology; Gene; Operon; Transcriptome; Flagellin; Genetics; Campylobacter; Genome; Biogenesis; Phenotype; Microarray analysis techniques; Gene expression; Microbiology; Bacteria; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001727085,0.0002863166,0.000519067,0.0004998554,0.000323778,0.0005736246,0.0002153903,0.0004805566,0.0008576416],"category_scores_gemma":[0.0003397473,0.0002389328,0.0002789925,0.0003884529,0.0003616307,0.0002478089,0.0003424287,0.0004645583,0.0003978422],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000388554,"about_ca_system_score_gemma":0.0003345923,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002231153,"about_ca_topic_score_gemma":0.002857212,"domain_scores_codex":[0.9997296,0.0000171606,0.000009185618,0.0001156517,0.00006862657,0.00005977074],"domain_scores_gemma":[0.9998044,0.00005390629,0.00003039794,0.00001154643,0.00005462615,0.00004513989],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002086845,0.00002214743,0.003559208,0.00008777825,0.000007303823,0.00006448346,0.0001639416,0.0002055356,0.993619,0.00003697265,0.0001301708,0.001894632],"study_design_scores_gemma":[0.00002460154,0.0007557553,0.6857814,0.00007828732,0.00008321332,0.0006716751,0.002028727,0.007720648,0.2948702,0.0004721122,0.00741477,0.00009855925],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938543,0.000907055,0.0007835659,0.0001603726,0.00001996375,0.00002073626,0.00293587,0.00006195434,0.00125604],"genre_scores_gemma":[0.9858561,0.0007266538,0.002151832,0.0003429627,0.00002594682,0.000110446,0.007367053,0.00006130584,0.003357691],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002231153,"threshold_uncertainty_score":0.004436374,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04066294946022626,"score_gpt":0.2025098388413606,"score_spread":0.1618468893811343,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}