{"id":"W2028496847","doi":"10.1101/gr.819303","title":"Internet Contig Explorer (iCE)—A Tool for Visualizing Clone Fingerprint Maps","year":2003,"lang":"en","type":"article","venue":"Genome Research","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Cancer Agency","funders":"National Human Genome Research Institute; BC Cancer Agency; Michael Smith Health Research BC; Canada's Michael Smith Genome Sciences Centre","keywords":"Contig; Biology; Genome; Genetics; Bacterial artificial chromosome; Computational biology; Cloning (programming); Fingerprint (computing); clone (Java method); DNA sequencing; Java; Gene; Computer science; Artificial intelligence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001223659,0.000128454,0.0001346698,0.00008559324,0.0001469318,0.00004293536,0.0003058863,0.000192858,0.00006578805],"category_scores_gemma":[0.0002240281,0.0001242678,0.0001084676,0.000132774,0.0001372041,0.000002289333,0.0001862746,0.0001745069,0.00004466806],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003153916,"about_ca_system_score_gemma":0.00008302277,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000117462,"about_ca_topic_score_gemma":0.000004536906,"domain_scores_codex":[0.9984876,0.0001698943,0.000211954,0.0004860619,0.0001469109,0.0004975891],"domain_scores_gemma":[0.9990958,0.00003451584,0.00003947044,0.0005085866,0.0002337126,0.00008791001],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004374822,0.00006886263,0.0003310887,0.00002270711,0.00004311284,0.000001894183,0.00004647496,0.000003108617,0.976367,0.01541749,0.006243449,0.00141104],"study_design_scores_gemma":[0.0002601216,0.0002672343,0.0002317068,0.000006361186,0.000004153627,0.000009381619,0.00005506163,0.00001405617,0.4013884,0.001432191,0.5961852,0.0001461446],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7485451,0.002194574,0.2401393,0.0005588453,0.00008690258,0.001842508,0.00007422487,0.00005665865,0.006501921],"genre_scores_gemma":[0.9829843,0.0003737261,0.01198979,0.0002230385,0.0001520737,0.001068097,0.0003126474,0.00004080337,0.0028555],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5899417,"threshold_uncertainty_score":0.5067494,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09716463731422166,"score_gpt":0.3928826204100065,"score_spread":0.2957179830957849,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}