{"id":"W2028847033","doi":"10.1128/jb.06417-11","title":"EspD Is Critical for the Virulence-Mediating ESX-1 Secretion System in Mycobacterium tuberculosis","year":2011,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":85,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"European Maritime and Fisheries Fund; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Secretion; Biology; Mycobacterium tuberculosis; Type three secretion system; Mutagenesis; Microbiology; Cell biology; Virulence; Tuberculosis; Mutation; Genetics; Gene; Biochemistry","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002620376,0.0002517351,0.0002600483,0.0003072965,0.0002897735,0.0005450836,0.0002309359,0.0005235401,0.001133067],"category_scores_gemma":[0.0006899718,0.0002576915,0.0002586409,0.0001784708,0.0003123691,0.0002988116,0.0004044952,0.0003923751,0.0006953481],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002725774,"about_ca_system_score_gemma":0.0002204638,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001835107,"about_ca_topic_score_gemma":0.0001569547,"domain_scores_codex":[0.9998042,0.00005705519,0.00003072647,0.00002971371,0.00005210792,0.00002619774],"domain_scores_gemma":[0.9997452,0.00006725143,0.00007609634,0.00003318375,0.00002925491,0.00004901169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003917442,0.00003823218,0.003940566,0.00007578994,0.00001111944,0.0005619474,0.00003027415,0.0001472694,0.9923108,0.0001874714,0.0001212257,0.002183493],"study_design_scores_gemma":[0.0001283416,0.0004967182,0.1205523,0.00007010442,0.00008430738,0.00653028,0.0002683656,0.004334668,0.8567287,0.0009367809,0.009838115,0.00003140168],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948499,0.002466468,0.001582009,0.0002073815,0.00003877103,0.000007987467,0.0001938171,0.00003414419,0.0006195268],"genre_scores_gemma":[0.9975312,0.0004046596,0.001006659,0.00005634916,0.00001150194,0.00000608849,0.0004893896,0.000008482151,0.0004856048],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001133067,"threshold_uncertainty_score":0.003790438,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05067221166369788,"score_gpt":0.3362656593224954,"score_spread":0.2855934476587975,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}