{"id":"W2028929971","doi":"10.4161/mge.19510","title":"Integron associated mobile genes","year":2012,"lang":"en","type":"article","venue":"Mobile Genetic Elements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Medical Research Council; National Health and Medical Research Council; Australian Research Council","keywords":"Gene; Horizontal gene transfer; Biology; Lineage (genetic); Genome; Context (archaeology); Mobile genetic elements; Tree of life (biology); Extant taxon; Evolutionary biology; Genetics; Computational biology; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002392332,0.0002469581,0.0001948979,0.00004062862,0.0001365891,0.00002042945,0.0002430612,0.0001351905,0.0001248462],"category_scores_gemma":[0.0000245119,0.0002384078,0.0001133397,0.00009023962,0.0000615891,0.000001220696,0.000263587,0.00006861334,0.00007592876],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003312453,"about_ca_system_score_gemma":0.00003310243,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002064109,"about_ca_topic_score_gemma":0.00002208558,"domain_scores_codex":[0.9984449,0.00007284478,0.0003427359,0.0003399057,0.0001792953,0.0006203524],"domain_scores_gemma":[0.9992227,0.00001014338,0.000124107,0.0004062043,0.00008296334,0.0001538723],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002007407,0.0003321575,0.3265463,0.00001191531,0.0002629183,8.986806e-7,0.0001886966,0.0002092665,0.6314538,0.00000776359,0.003248035,0.03771811],"study_design_scores_gemma":[0.001315433,0.001275272,0.2004581,0.00001449132,0.0001120731,0.00001210587,0.000525257,0.00004979155,0.2506579,0.00006045285,0.544772,0.0007471462],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9818366,0.01573375,0.0001567802,0.000007202391,0.0005513577,0.0005534462,0.00004539925,0.000009811775,0.001105623],"genre_scores_gemma":[0.9945177,0.001439892,0.001419406,0.0001954381,0.0004549459,0.0005789899,0.0001019218,0.0000443793,0.001247268],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5415239,"threshold_uncertainty_score":0.9721988,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009322398372992681,"score_gpt":0.2505665924723469,"score_spread":0.2412441940993542,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}