{"id":"W2029124627","doi":"10.1016/j.protis.2009.06.003","title":"Phylogenetic Position and Morphology of Spirotrichosomidae (Parabasalia): New Evidence from Leptospironympha of Cryptocercus punctulatus","year":2009,"lang":"en","type":"article","venue":"Protist","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"","keywords":"Biology; Phylogenetic tree; Clade; Flagellum; Evolutionary biology; Phylogenetics; Zoology; Lineage (genetic); Sister group; Molecular phylogenetics; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009457517,0.0001247789,0.0002596221,0.00001276841,0.00005696314,0.00002452921,0.0001631446,0.00009679344,0.0002939313],"category_scores_gemma":[0.00005197817,0.0000523108,0.0000537082,0.000161062,0.0001069438,0.0001093607,0.00003198356,0.0000476653,0.000005735229],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000104213,"about_ca_system_score_gemma":0.00001185739,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00330009,"about_ca_topic_score_gemma":0.0000899857,"domain_scores_codex":[0.9990918,0.00005649144,0.0003072511,0.0002468526,0.0001338212,0.000163751],"domain_scores_gemma":[0.9995233,0.00008594762,0.0002011785,0.00006157636,0.00005997524,0.00006802863],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000769575,0.00005248655,0.05547352,0.000006654584,0.000006156889,0.000001455969,0.00004451369,0.000001214539,0.9047562,0.00008260724,0.00005838791,0.03943988],"study_design_scores_gemma":[0.0001050701,0.0006919924,0.6946874,0.0000711571,0.00001473549,0.00000376806,0.000007090659,0.000004213746,0.3024896,0.001803894,0.00003783796,0.00008325642],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973292,0.001329513,0.000006964915,0.0007502367,0.00006740499,0.0003720459,0.00003653022,0.00001437887,0.00009370282],"genre_scores_gemma":[0.998983,0.0001355407,0.000526945,0.00014885,0.0001632583,0.000007022089,0.00001587694,6.277048e-7,0.00001882775],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6392139,"threshold_uncertainty_score":0.4988771,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02390996992341022,"score_gpt":0.2317345696184821,"score_spread":0.2078245996950719,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}