{"id":"W2029536289","doi":"10.1111/j.1574-6968.2007.00734.x","title":"The O<sub>2</sub>-responsive repressor PpsR2 but not PpsR1 transduces a light signal sensed by the BphP1 phytochrome in<i>Rhodopseudomonas palustris</i>CGA009","year":2007,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Light effects on plants","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Boehringer Ingelheim Fonds; U.S. Department of Energy","keywords":"Repressor; Complementation; Rhodopseudomonas palustris; Phytochrome; Lac repressor; Transcription (linguistics); Psychological repression; Biology; Gene; Photosynthesis; Biophysics; Chemistry; Biochemistry; Transcription factor; Gene expression; Genetics; Mutant; Botany; Bacteria; Red light","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005854127,0.0003780073,0.0001796776,0.00009695477,0.0001032421,0.0001936593,0.000219739,0.000168874,0.001184562],"category_scores_gemma":[0.00009414203,0.0001521987,0.0001390221,0.0000923651,0.0002097157,0.0001179796,0.0001756208,0.0004044813,0.0003478256],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003555795,"about_ca_system_score_gemma":0.0001664194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001976076,"about_ca_topic_score_gemma":0.002419819,"domain_scores_codex":[0.999913,0.000007231762,0.000003843083,0.00002734637,0.00003013556,0.00001844812],"domain_scores_gemma":[0.9999017,0.00002516619,0.00002731116,0.00001269237,0.000007579054,0.00002557094],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001888526,0.000003854651,0.00006358189,0.000003430478,4.602342e-7,0.00000696705,0.000002621277,0.000007628353,0.9997421,0.00001197589,0.000004028741,0.0001345264],"study_design_scores_gemma":[0.000007025734,0.0000714936,0.007124925,0.000001523711,0.000004695626,0.0001452354,0.0000214587,0.0003694236,0.991393,0.00002470522,0.0008332564,0.000003399419],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979273,0.0001494832,0.0009550822,0.00003879676,0.000005611223,0.000006771616,0.000151159,0.0000429262,0.0007229001],"genre_scores_gemma":[0.9947646,0.0001285744,0.001573339,0.00004310246,0.00000399819,0.00001428569,0.0009619962,0.00005800727,0.002452124],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001976076,"threshold_uncertainty_score":0.003962696,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007353557825973703,"score_gpt":0.1923382402237032,"score_spread":0.1849846823977295,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}