{"id":"W2029763582","doi":"10.5194/bgd-9-16977-2012","title":"Comprehensive phylogenetic reconstruction of relationships in <i>Octocorallia (Cnidaria</i>: <i>Anthozoa</i>) from the Atlantic ocean using <i>mtMutS</i> and <i>nad2</i> genes tree reconstructions","year":2012,"lang":"en","type":"article","venue":"","topic":"Coral and Marine Ecosystems Studies","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Environment Research Council; European Commission; University of Southampton","keywords":"Octocorallia; Clade; Biology; Phylogenetic tree; Anthozoa; Phylogenetics; Cnidaria; Evolutionary biology; Gene; Ecology; Coelenterata; Genetics; Coral","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001692483,0.0002649685,0.0002125276,0.001045714,0.0005221384,0.0005429736,0.000196618,0.0002305645,0.001202938],"category_scores_gemma":[0.0004357419,0.0001489873,0.0002964835,0.001070567,0.0002008689,0.0002073648,0.0004074752,0.0003965149,0.0004233564],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004184445,"about_ca_system_score_gemma":0.0004512334,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003659785,"about_ca_topic_score_gemma":0.0127639,"domain_scores_codex":[0.9999141,0.00001200942,0.000006480229,0.00003714966,0.0000150773,0.00001533745],"domain_scores_gemma":[0.9998026,0.0000448364,0.00005320368,0.00002006811,0.00003238883,0.00004686051],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001107801,0.0001136253,0.4128526,0.0004580992,0.0003779155,0.0008197988,0.002005551,0.00703245,0.5018105,0.001243731,0.001225426,0.07095253],"study_design_scores_gemma":[0.00003319173,0.0001418663,0.9559689,0.0000949008,0.000237551,0.0005253237,0.001179641,0.01887082,0.009867685,0.0003785057,0.01267158,0.00003011384],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962204,0.0001757078,0.001084618,0.00002321132,0.000003793649,0.000009887264,0.001503971,0.00002792081,0.0009505941],"genre_scores_gemma":[0.990244,0.0001293786,0.004069881,0.00001463204,0.000003857951,0.00001515894,0.005074542,0.00002275665,0.0004258273],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003659785,"threshold_uncertainty_score":0.007276952,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07059548502467293,"score_gpt":0.263364520878331,"score_spread":0.1927690358536581,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}