{"id":"W2029821696","doi":"10.1073/pnas.0505575102","title":"Location analysis of estrogen receptor α target promoters reveals that FOXA1 defines a domain of the estrogen response","year":2005,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":373,"is_retracted":false,"has_abstract":true,"ca_institutions":"Montreal Clinical Research Institute; McGill University Health Centre","funders":"","keywords":"FOXA1; Promoter; Chromatin immunoprecipitation; Biology; Estrogen receptor alpha; Estrogen receptor; Chromatin; Nuclear receptor; Coactivator; Enhancer; Hormone response element; Transcription factor; Regulation of gene expression; RNA polymerase II; Cell biology; Estrogen receptor beta; Cancer research; Gene expression; Gene; Genetics; Breast cancer; Cancer","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001189521,0.0002434616,0.0002524843,0.0004495322,0.0002031969,0.0001979066,0.0001754176,0.0001523227,0.0008998437],"category_scores_gemma":[0.0001519017,0.0001842752,0.0002917943,0.0002973407,0.0001914768,0.0001493698,0.0001870997,0.0002989957,0.0005317696],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000355393,"about_ca_system_score_gemma":0.0002167938,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002155532,"about_ca_topic_score_gemma":0.003262054,"domain_scores_codex":[0.9999151,0.000005244093,0.000003878496,0.00004090311,0.00002061596,0.00001415244],"domain_scores_gemma":[0.999915,0.00001865721,0.00002739309,0.000009050598,0.00001450443,0.00001529075],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001370521,0.00001202725,0.004616594,0.00004343399,0.00001375792,0.00004673512,0.00003464178,0.0001189042,0.9889526,0.0001243364,0.00004943722,0.005850332],"study_design_scores_gemma":[0.00002370571,0.0002732319,0.1919432,0.00002833189,0.00005736128,0.001149641,0.0001163966,0.003384648,0.7907098,0.0004945906,0.01180269,0.00001649478],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9791678,0.00516705,0.01271798,0.00009115363,0.00001498812,0.00002474734,0.001373154,0.0001104571,0.001332625],"genre_scores_gemma":[0.9797524,0.001839817,0.01167195,0.00008391133,0.00001053565,0.00003398083,0.003266381,0.00003087011,0.003310146],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002155532,"threshold_uncertainty_score":0.004285991,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01632602950529422,"score_gpt":0.27734966209425,"score_spread":0.2610236325889558,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}