{"id":"W2029955597","doi":"10.1093/jac/dku419","title":"Antiretroviral-naive and -treated HIV-1 patients can harbour more resistant viruses in CSF than in plasma","year":2014,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Bell (Canada)","funders":"","keywords":"Medicine; Reverse transcriptase; Virology; Genotype; Human immunodeficiency virus (HIV); Virus; Lentivirus; Gene; Internal medicine; Immunology; Gastroenterology; Viral disease; Polymerase chain reaction; Biology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004849272,0.0003387854,0.000341237,0.0006443341,0.0003010205,0.0007172094,0.000203383,0.0005273369,0.002343106],"category_scores_gemma":[0.00198034,0.0001581454,0.0001889104,0.0003663915,0.0002820524,0.0003598371,0.0002327259,0.0002227391,0.0003917214],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001129997,"about_ca_system_score_gemma":0.0001094944,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003394134,"about_ca_topic_score_gemma":0.000321182,"domain_scores_codex":[0.9995605,0.000095658,0.0000723599,0.0000987398,0.00009792179,0.00007474918],"domain_scores_gemma":[0.999057,0.0003012224,0.0004261437,0.0000504667,0.00007811502,0.00008712034],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001093566,0.000079036,0.9691031,0.00006962934,0.00008353815,0.001175026,0.0002414305,0.00004843585,0.01382068,0.00003943666,0.0001830069,0.01406304],"study_design_scores_gemma":[0.00007230597,0.0008421383,0.9815372,0.00004864714,0.00008489878,0.01249296,0.000360335,0.0002423103,0.003259291,0.0001137796,0.0009331117,0.00001298255],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988451,0.000670082,0.00006263077,0.00001942972,0.000005302637,0.000005134387,0.00008025309,0.000004417719,0.000307577],"genre_scores_gemma":[0.9994603,0.0001640174,0.0001262282,0.00003800917,0.00001544161,0.000005555201,0.00009838936,0.000001679508,0.00009043882],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002343106,"threshold_uncertainty_score":0.007838488,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00871762309051087,"score_gpt":0.2420361783084592,"score_spread":0.2333185552179484,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}