{"id":"W2030677513","doi":"10.1139/g05-119","title":"Quantification of the retrotransposon BARE-1 reveals the dynamic nature of the barley genome","year":2006,"lang":"en","type":"article","venue":"Genome","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Canadian Food Inspection Agency","keywords":"Hordeum vulgare; Retrotransposon; Biology; Genome; Hordeum; GenBank; Genetics; Long terminal repeat; Triticeae; Genome size; Gene; Botany; Transposable element; Poaceae","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003251149,0.0005232273,0.0004209492,0.0007445074,0.0001635068,0.0005062748,0.0004279428,0.0003842364,0.001238895],"category_scores_gemma":[0.0004905005,0.0002626457,0.0002867532,0.0005106284,0.0002786971,0.0003002953,0.0002043354,0.0004619325,0.0003948784],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003035227,"about_ca_system_score_gemma":0.0001119631,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006136602,"about_ca_topic_score_gemma":0.0008985591,"domain_scores_codex":[0.9996504,0.00003101225,0.0000169014,0.0001616228,0.00009665795,0.00004347534],"domain_scores_gemma":[0.9996578,0.0001122702,0.00008544085,0.00003445932,0.00006955034,0.00004044702],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004573671,0.000008600355,0.0008534416,0.0000261142,0.000005409237,0.00001063577,0.00002447344,0.0000442592,0.997509,0.00001395062,0.000006362513,0.001452067],"study_design_scores_gemma":[0.00001389843,0.0003484746,0.09445318,0.00001796412,0.00005359945,0.000326763,0.0001128771,0.004360041,0.8982609,0.0001279133,0.001899921,0.00002441706],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9801728,0.001575282,0.01594349,0.00003678831,0.0000265468,0.00004342941,0.001165487,0.0002026988,0.0008334455],"genre_scores_gemma":[0.9650505,0.0007714511,0.02841562,0.00005685793,0.00002433982,0.0001051987,0.002764873,0.00006668116,0.002744415],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001238895,"threshold_uncertainty_score":0.00414449,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008618383983007459,"score_gpt":0.1995040030995186,"score_spread":0.1908856191165111,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}