{"id":"W2030723959","doi":"10.4238/2014.june.9.6","title":"Water buffalo genome characterization by the Illumina BovineHD BeadChip","year":2014,"lang":"en","type":"article","venue":"Genetics and Molecular Research","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Genome; Biology; Illumina dye sequencing; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006315987,0.0001697553,0.0001157466,0.00003153956,0.0004507651,0.0001515953,0.0004743939,0.0001566244,0.00002585461],"category_scores_gemma":[0.00005530405,0.0001175656,0.00004515488,0.00005163383,0.0004096558,0.000002540276,0.0004465645,0.0001938451,0.00002005618],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006376747,"about_ca_system_score_gemma":0.00002432803,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002548011,"about_ca_topic_score_gemma":0.000004418143,"domain_scores_codex":[0.9982812,0.0002490662,0.0001802881,0.0004545081,0.0003297838,0.0005051906],"domain_scores_gemma":[0.9989797,0.00001388203,0.00003550686,0.0006834861,0.0001382429,0.0001492084],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002228641,0.00003475404,0.0002399315,0.00001372863,0.00002640941,3.022937e-7,0.00008413494,0.00001047542,0.9906274,0.0006841067,0.001703585,0.006552874],"study_design_scores_gemma":[0.0004012759,0.0006139559,0.01282987,0.000004525192,0.00001463916,0.000009546379,0.00004037693,0.00006258013,0.56378,0.001020097,0.4209884,0.0002346824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9661247,0.001962054,0.0288098,0.001300964,0.00007602113,0.0003319977,0.00004756174,0.00000643939,0.001340498],"genre_scores_gemma":[0.9959363,0.0003976038,0.0007124184,0.0005100478,0.0001862711,0.00004582601,0.0004747451,0.00004213692,0.001694668],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4268474,"threshold_uncertainty_score":0.4794185,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0159029713659971,"score_gpt":0.2710282959813621,"score_spread":0.255125324615365,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}