{"id":"W2031605855","doi":"10.1139/w09-069","title":"Phylogenetic analysis of methanotrophic communities in cover soils of a landfill in Ontario","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Biotechnology Research Institute; Agriculture and Agri-Food Canada","funders":"Natural Resources Canada","keywords":"Methanotroph; Temperature gradient gel electrophoresis; Biology; Dominance (genetics); Microbial population biology; 16S ribosomal RNA; Transect; Soil microbiology; Soil water; Ecology; Botany; Anaerobic oxidation of methane; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003010709,0.00009239878,0.0004265712,0.0007073587,0.00001219651,0.000002366676,0.0001907944,0.0001592303,0.000135498],"category_scores_gemma":[0.00003643228,0.00008739916,0.0001373819,0.0002676305,0.0001013793,0.000003228325,0.00001022227,0.0001569165,5.542851e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005121303,"about_ca_system_score_gemma":0.0006089344,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.1680107,"about_ca_topic_score_gemma":0.92281,"domain_scores_codex":[0.9990826,0.0001581984,0.0004639181,0.00008051725,0.00002033009,0.000194448],"domain_scores_gemma":[0.9994053,0.00001429358,0.0002353726,0.000166383,0.0001066558,0.0000720586],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001032953,0.00003002742,0.07950831,0.000004997139,0.0001607305,0.000008312597,0.0004710353,0.002580132,0.9165652,0.00001758745,0.0002560853,0.0002942247],"study_design_scores_gemma":[0.002229804,0.001250707,0.6975265,0.0000919115,0.0004468005,0.0001475678,0.0003376433,0.00001597978,0.2684119,0.0001089521,0.02913935,0.0002928775],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974595,0.002098392,0.00004993725,0.00004511361,0.00011432,0.00004272392,0.00009257944,2.428293e-7,0.00009721539],"genre_scores_gemma":[0.9993279,0.0001226581,0.0001674987,0.0001969827,0.00002239593,3.618166e-7,0.0001000072,0.000004043789,0.00005817527],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7547992,"threshold_uncertainty_score":0.8375296,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01111781663741089,"score_gpt":0.2049587634497817,"score_spread":0.1938409468123708,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}