{"id":"W2031653320","doi":"10.4161/epi.19462","title":"Retrotransposons as a major source of epigenetic variations in the mammalian genome","year":2012,"lang":"en","type":"article","venue":"Epigenetics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Kootenay Association for Science & Technology","funders":"National Institute of Environmental Health Sciences; National Institute of General Medical Sciences","keywords":"Retrotransposon; Biology; DNA methylation; Epigenetics; Genetics; Genome; Gene; DNA; Methylation; Histone; Transposable element; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002436618,0.0002008346,0.0002037133,0.0004572159,0.0001462352,0.0003208102,0.0002129103,0.0001905779,0.0006150163],"category_scores_gemma":[0.0002312285,0.0001868127,0.0001777609,0.0003132113,0.000256244,0.000245319,0.0002978889,0.0003554681,0.0002689494],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001156289,"about_ca_system_score_gemma":0.0001355691,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001639735,"about_ca_topic_score_gemma":0.000357093,"domain_scores_codex":[0.9998249,0.0000233912,0.000009858415,0.00006387269,0.00006618497,0.00001173179],"domain_scores_gemma":[0.999816,0.00003718667,0.00006692119,0.00003430246,0.00001979764,0.00002582908],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004024988,0.000007777906,0.002859807,0.00002396483,0.00001200522,0.00005087862,0.00003104879,0.00009383811,0.9911689,0.0003377338,0.000008084165,0.00536563],"study_design_scores_gemma":[0.00001686072,0.0005651037,0.1410094,0.00002545669,0.0001180787,0.001642245,0.000113997,0.0026731,0.844653,0.001691205,0.007463692,0.00002777311],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.976027,0.002760125,0.01933247,0.00006102463,0.00001095788,0.00001882934,0.0002428836,0.0001226425,0.001424131],"genre_scores_gemma":[0.9909039,0.000910735,0.006329264,0.00003709855,0.00001778476,0.00001373732,0.0003436914,0.00002267698,0.001421005],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006150163,"threshold_uncertainty_score":0.002057493,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01306861884480588,"score_gpt":0.2604375641219834,"score_spread":0.2473689452771775,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}