{"id":"W2031800434","doi":"10.1007/s10969-005-9004-6","title":"The crystal structure of Rv0793, a hypothetical monooxygenase from M.␣tuberculosis","year":2006,"lang":"en","type":"article","venue":"Journal of Structural and Functional Genomics","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"Lawrence Berkeley National Laboratory","keywords":"Mycobacterium tuberculosis; Tuberculosis; Polyketide; Biology; Streptomyces coelicolor; Microbiology; Oxidoreductase; Open reading frame; Bacteria; Computational biology; Function (biology); Escherichia coli; Monooxygenase; Structural genomics; Genetics; Protein structure; Gene; Streptomyces; Biochemistry; Peptide sequence; Biosynthesis; Cytochrome P450; Enzyme","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006554293,0.0001121787,0.0001385154,0.00002465538,0.0001099046,0.00003016073,0.0001220065,0.0001143133,0.00002562108],"category_scores_gemma":[0.00003930844,0.00006736706,0.0001346006,0.00004318086,0.0002138923,0.000004768746,0.00008442454,0.0001670753,3.218646e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001451637,"about_ca_system_score_gemma":0.00006926578,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003692846,"about_ca_topic_score_gemma":0.00001670872,"domain_scores_codex":[0.9991677,0.00003124862,0.0003109987,0.0001326891,0.0002089803,0.0001483567],"domain_scores_gemma":[0.9994407,0.00003389873,0.0001534282,0.0001118007,0.0001800042,0.00008012414],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005171832,0.00001014986,0.0008024313,0.000005197792,0.00009256,0.000002198197,0.00000636468,0.0001275637,0.9958279,0.0004456576,0.0007676585,0.001395161],"study_design_scores_gemma":[0.001108507,0.000366787,0.04447492,0.000009423872,0.00006583981,0.0003485017,0.00007261254,0.000141987,0.9094081,0.02472032,0.01909438,0.0001886045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956,0.003374117,0.0003478651,0.0003210264,0.0001580954,0.00004835157,0.0000935286,0.000001058489,0.0000559216],"genre_scores_gemma":[0.9978766,0.0001890545,0.00107836,0.00006054862,0.0006590721,4.26649e-7,0.00004553481,0.000009673567,0.00008070753],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08641975,"threshold_uncertainty_score":0.2747149,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005991765149452562,"score_gpt":0.2057240224097127,"score_spread":0.1997322572602601,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}