{"id":"W2032286908","doi":"10.3354/dao075239","title":"Development and validation of an RNA- and DNA-based quantitative PCR assay for determination of Kudoa thyrsites infection levels in Atlantic salmon Salmo salar","year":2007,"lang":"en","type":"article","venue":"Diseases of Aquatic Organisms","topic":"Myxozoan Parasites in Aquatic Species","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Fisheries and Oceans Canada; BC Centre for Aquatic Health Sciences","funders":"Oregon State University","keywords":"Biology; Salmo; Histology; RNA; Real-time polymerase chain reaction; 18S ribosomal RNA; Housekeeping gene; Molecular biology; Gene; Gene expression; Fish <Actinopterygii>; Fishery; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004964561,0.0001275404,0.0002257882,0.0001539603,0.00003005152,0.000009357696,0.00006514598,0.00008314561,0.00000836254],"category_scores_gemma":[0.0008532398,0.0001287555,0.00003372075,0.0001193572,0.0001269164,0.00001850446,0.00002875764,0.0000231273,3.13479e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002051676,"about_ca_system_score_gemma":0.0000897027,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003473777,"about_ca_topic_score_gemma":0.0001204795,"domain_scores_codex":[0.9989833,0.00007052776,0.0004387623,0.000216186,0.0001684734,0.0001227489],"domain_scores_gemma":[0.9991037,0.0002564929,0.0003154131,0.0001534884,0.0001178642,0.00005300801],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001811145,0.0002378576,0.2093246,0.0003153236,0.00003189318,8.212793e-7,0.0004745834,0.00003056622,0.7843181,0.0002690342,0.000002652106,0.00481347],"study_design_scores_gemma":[0.000625368,0.0003846032,0.2951075,0.00005863569,0.00005015277,9.42152e-7,0.0001758601,0.0009732377,0.7022516,0.0002670046,0.000007271531,0.00009783805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9345211,0.0001652497,0.06488236,0.000009777814,0.00002840084,0.0003433707,0.00002848779,0.000004615784,0.00001660352],"genre_scores_gemma":[0.9581804,0.00001142994,0.04155417,0.00001156219,0.000012787,0.000008621949,0.0001999395,0.00001566799,0.000005373699],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0857829,"threshold_uncertainty_score":0.5250496,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01958860329149895,"score_gpt":0.2959142723746209,"score_spread":0.2763256690831219,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}