{"id":"W2033328184","doi":"10.1016/j.virol.2007.03.023","title":"Recombination in feline immunodeficiency virus genomes from naturally infected cougars","year":2007,"lang":"en","type":"article","venue":"Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; McGill University","keywords":"Biology; Recombination; Genome; Phylogenetic tree; Virology; Genetics; Population; Virus; Biological dispersal; Feline immunodeficiency virus; Genetic diversity; Lentivirus; Gene; Evolutionary biology; Viral disease","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003848514,0.0002314369,0.0003501184,0.0009006003,0.0008240616,0.0007249905,0.0004634967,0.0007434913,0.001099604],"category_scores_gemma":[0.0008656675,0.000219854,0.0004162627,0.0003692674,0.0003402313,0.0003042783,0.0004043691,0.000954996,0.0002312001],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006694573,"about_ca_system_score_gemma":0.0002048656,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004810752,"about_ca_topic_score_gemma":0.003605356,"domain_scores_codex":[0.9995767,0.00009326349,0.00002479785,0.0001046626,0.00004719045,0.0001533297],"domain_scores_gemma":[0.9993336,0.0003250231,0.0001056401,0.0000932345,0.00006936718,0.00007317864],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001184718,0.0001856133,0.02057848,0.00009993474,0.00006373732,0.001352816,0.001643342,0.0003978704,0.9682574,0.0008344392,0.000133622,0.005268112],"study_design_scores_gemma":[0.0001085188,0.002006117,0.4867796,0.00007446614,0.0001958551,0.01096951,0.003689588,0.003466108,0.4849537,0.0007487686,0.006944342,0.00006343929],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987224,0.0002835817,0.0002693119,0.00001231466,0.000005023104,0.0000107305,0.0001225069,0.000006278563,0.0005679089],"genre_scores_gemma":[0.9983703,0.00009680393,0.0002303205,0.00002125673,0.000003565348,0.00000755263,0.0005709899,0.000008167096,0.000690999],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004810752,"threshold_uncertainty_score":0.009565473,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009551212477279225,"score_gpt":0.2619859916191214,"score_spread":0.2524347791418421,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}