{"id":"W2033507368","doi":"10.1073/pnas.0407371101","title":"Structure and function of the phenazine biosynthetic protein PhzF from <i>Pseudomonas fluorescens</i>","year":2004,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":99,"is_retracted":false,"has_abstract":true,"ca_institutions":"Structural Genomics Consortium","funders":"National Institute of General Medical Sciences; National Institutes of Health; European Synchrotron Radiation Facility; Deutsche Forschungsgemeinschaft","keywords":"Phenazine; Pyocyanin; Stereochemistry; Chromobacterium violaceum; Pseudomonas fluorescens; Chemistry; Biochemistry; Isomerase; Biology; Virulence; Enzyme; Bacteria; Quorum sensing","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001741,0.00007407229,0.00009080547,0.00003133396,0.00008336482,0.000007812539,0.0004133722,0.0001590359,0.0000032828],"category_scores_gemma":[0.0001074154,0.0000410859,0.00004448815,0.0002113408,0.0008932123,0.000007187435,0.0001619158,0.00008425801,8.558317e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005413508,"about_ca_system_score_gemma":0.00002633446,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009608072,"about_ca_topic_score_gemma":5.697019e-7,"domain_scores_codex":[0.999256,0.000004309131,0.0001762409,0.0001891001,0.000290372,0.00008402933],"domain_scores_gemma":[0.9995891,0.000005153844,0.0002555241,0.00001512262,0.0001212073,0.00001389035],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002439682,0.00001594217,0.0007414125,0.00001477542,0.00001179557,6.576648e-10,0.00001547828,0.00001644823,0.9960097,0.002756644,0.00002674347,0.00036667],"study_design_scores_gemma":[0.0001881339,0.00008697184,0.02488322,0.00004219829,0.00001124281,0.000002576439,0.00001967124,0.00001003799,0.9444386,0.0299676,0.0003038027,0.00004591123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970762,0.0002143528,0.00000121934,0.002370089,0.00002646979,0.0001565521,0.00005505708,0.000002149031,0.00009788344],"genre_scores_gemma":[0.998868,0.0000414407,0.0008853526,0.0001088387,0.00007158663,0.000002436117,5.097644e-7,0.000003028542,0.00001880949],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05157106,"threshold_uncertainty_score":0.3291078,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01054895575756784,"score_gpt":0.2270396430537064,"score_spread":0.2164906872961386,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}