{"id":"W2033560237","doi":"10.1371/journal.ppat.1002621","title":"Virulence Regulator EspR of Mycobacterium tuberculosis Is a Nucleoid-Associated Protein","year":2012,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":142,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; SystemsX.ch; Canadian Thoracic Society; Colorado State University; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Institutes of Health; National Science Foundation","keywords":"Operon; Regulon; Nucleoid; Biology; Gene; Virulence; Repressor; Promoter; Molecular biology; Regulator; Cell biology; Regulation of gene expression; Chemistry; Gene expression; Genetics; Escherichia coli","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001309265,0.0004077865,0.0003372863,0.0002184473,0.0001414182,0.0003030378,0.0001489695,0.0002793308,0.001212475],"category_scores_gemma":[0.0001560059,0.0001499816,0.0002981435,0.0001935039,0.0001716023,0.000133226,0.0003166765,0.0003766772,0.001041249],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002380552,"about_ca_system_score_gemma":0.0001258633,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003296929,"about_ca_topic_score_gemma":0.0003154381,"domain_scores_codex":[0.9998192,0.00002071805,0.00001058154,0.00007636647,0.00005452234,0.0000186096],"domain_scores_gemma":[0.9999192,0.00001333206,0.00002781085,0.000009572568,0.00001423607,0.00001590904],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004728939,0.000007309938,0.0004226214,0.00004638132,0.000003643087,0.00006301822,0.000007232668,0.00004158233,0.9978662,0.00003805379,0.00004969279,0.00140698],"study_design_scores_gemma":[0.00002886315,0.0003930953,0.05602208,0.00003696025,0.00004025603,0.001559641,0.00006849426,0.002589034,0.9290177,0.0002360328,0.009990304,0.00001762104],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9797671,0.007469322,0.007697315,0.0002903045,0.00006364699,0.00002397073,0.001823437,0.0004779884,0.002386933],"genre_scores_gemma":[0.9865644,0.001358213,0.004478151,0.0001385198,0.00002884879,0.00002291743,0.003274073,0.0000622996,0.004072602],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001212475,"threshold_uncertainty_score":0.004056156,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03246131314820416,"score_gpt":0.2924848105689465,"score_spread":0.2600234974207423,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}