{"id":"W2033700906","doi":"10.1089/aid.2011.0178","title":"Transmission of Two Distinct HIV Type 1 Strains to an Individual That Were Harbored for Many Years by Another","year":2011,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"Rijksinstituut voor Volksgezondheid en Milieu; Centers for Disease Control and Prevention; National Institutes of Health","keywords":"Transmission (telecommunications); Biology; Virology; Recombination; Strain (injury); Lentivirus; Human immunodeficiency virus (HIV); Genetics; Diversity (politics); Coinfection; Viral evolution; Evolutionary biology; Genome; Viral disease; Gene; Computer science; Telecommunications","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007389417,0.0002933659,0.0004514552,0.0003761709,0.0007553009,0.0009688502,0.0003598762,0.0006163585,0.001580129],"category_scores_gemma":[0.00127736,0.0002230626,0.0004911895,0.0002160839,0.0004467027,0.0006622239,0.00160873,0.001582095,0.0006132395],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000255443,"about_ca_system_score_gemma":0.0002557925,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004965764,"about_ca_topic_score_gemma":0.0004840733,"domain_scores_codex":[0.9993775,0.0001273104,0.00004387686,0.0002109364,0.0001121811,0.0001281863],"domain_scores_gemma":[0.9992174,0.0001294496,0.0002018284,0.0002525327,0.00007553176,0.0001233165],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","study_design_scores_codex":[0.0009153312,0.0007426116,0.08693444,0.0002309254,0.0002960459,0.004296354,0.003104957,0.0002827104,0.8300665,0.009486108,0.0007818788,0.06286213],"study_design_scores_gemma":[0.0002232803,0.01328321,0.3370621,0.0004046552,0.001486063,0.1156693,0.008053076,0.005126013,0.4582401,0.0116034,0.04844512,0.0004036966],"study_design_candidate":"case_report","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9887736,0.001262549,0.006722245,0.0002116436,0.0001418518,0.00008085725,0.00008831379,0.00002742558,0.002691613],"genre_scores_gemma":[0.9901111,0.0007344471,0.00569973,0.0002640572,0.00006616092,0.00004916994,0.0001999438,0.0000162895,0.002859204],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001580129,"threshold_uncertainty_score":0.005286038,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1449851184113991,"score_gpt":0.3753481196200006,"score_spread":0.2303630012086015,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}